Gene Acid345_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4389 
Symbol 
ID4073295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5204268 
End bp5204930 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637986422 
ProductPadR family transcriptional regulator 
Protein accessionYP_593463 
Protein GI94971415 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACTA AACAACAAGA ACGCTTCGGT CTCTGGGAAC TCGCGGTGCT CGCGCTGCTG 
CGCGAGGCGC CTATGCACCC CTATCAAATG CAGAAGCTGC TGCGGCAGCG CCACAAGGAC
GAGATCCTCT CGCTGAAGCG CGGCTCGCTG TATCACGCGA TTCACCGGCT GGAGGCTGCG
GAGTTGATTG ACGCAGTGCG CACGGCACGC GATGGCAAGC GGCCGGAGCG GACTACCTAT
CGCATTGCGG CTGCGGGGAA GAACGCACTC CAGGAGTGGA TGCAGCAGAT GATCGGCGTG
CCTAAGCAGG AGTCCAGCGA CTTCATGGCC GCGCTGAGTT TCCTGCCGCT GCTCACCGTG
GAAACAACCA CGAAGAAATT GGCGGAGCGG GCTGCGGCGC TGGAGGCTGA GATCGCAGGC
ATGGCGGGGG GTATCAAGGT CACGGCTGAG TGGCTCCCCC GGATACACCT CGTCGAATCC
GAATATTTGC TCGCGATGCG GAAGGCGGAG TTGGCATGGG TGCGCGGCTT GGAGGCCGAC
CTACGCAGCG GCAAGCTCGC TTGGGACGGC GAAGAAATCC TGAAGAACCC GCACGTGGTG
AAGGCGCGCG AGGACGCGGG CAAAGATGCG GAGCCCCGCC GCGCTGGAAG GAAATCGAAA
TGA
 
Protein sequence
MRTKQQERFG LWELAVLALL REAPMHPYQM QKLLRQRHKD EILSLKRGSL YHAIHRLEAA 
ELIDAVRTAR DGKRPERTTY RIAAAGKNAL QEWMQQMIGV PKQESSDFMA ALSFLPLLTV
ETTTKKLAER AAALEAEIAG MAGGIKVTAE WLPRIHLVES EYLLAMRKAE LAWVRGLEAD
LRSGKLAWDG EEILKNPHVV KAREDAGKDA EPRRAGRKSK