| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4384 |
|---|
| Symbol | |
|---|
| ID | 4073290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5197112 |
|---|
| End bp | 5198131 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986417 |
|---|
| Product | transposase IS116/IS110/IS902 |
|---|
| Protein accession | YP_593458 |
|---|
| Protein GI | 94971410 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTG TAGGGTGTGA TTTCCATCCT GGCTGGCAAC AAGTTGCCGT TTTCGATTCA
GAAACCGGCG AGATCAGAGA ACTGAGGCTG CACAACGAGA GCGGTGAGGC CGAGCGCTTC
TATCGTTCGC TTCCGGTGCC AACGTTGGTC GGGCTTGAGG CGTGTGGCAA CACGCAGTGG
TTCGAGGATC TGCTCGATCG TTTGGGACAC GAAGTGTGGA TCGGGGATGC GGCAGCGATT
CGCGCCAGTT ACGTGCGCAA GCAGAAGACG GATCGACGCG ACGCTGGGCA CATTCTCAAG
CTGCTGATCG AGGGCCGCTT TCCTCGACTG TGGCGACCTA GTGCGGCGGA GCGCGATGTG
CGGCAGTTGC TCATTCATCG CGATCGCCTG GTCGGCATTC GTTCCCGCGT TAAAAACGGA
CTGCAGCACT TGATGCTGAA CAAGGGCAGG CAGATGAAGT TCAAGCTGTG GAGTGAAGCC
GGCCAACAGC AGCTCCGAGA GTTGCCGCTC GAAGGATGGG CAGCACAACG ACGGAAAGAC
CTGCTGCATT TACTCGGGCA GATCACCCCG TTGATCGAAG AGCTGAATCG TGCAGTGGAG
CAGGCCGCCT ATGCAAATGA ACGTGCACGG TTGCTGATGA CACAACCGGG AGTCGGTCCG
ATCACGGCGC TTGCATACGT TCTGACGATG GGCGATGTCT CGCGGTTCAA GCGCGGCAAG
CAAATCGGCA GCTATCTAGG GCTGATTCCA TCCGAACACA GCTCGAGCAA GCGGCGCCGA
CTGGGATCGA TCAGCAAACA AGGCAGCCCG TTCCTCCGCA TGTTGCTGGT GGAGAGCGCG
CAAACGGTGA CCCGCTTGGA CGAAGGATTT CGAAAGCAGT ATCAACATCG CTGTCACCGC
AAGATGAAAG CCGTAGCTAA AGTGGCGGCA GCGAGAAGGT TAGCCGTGCG ACTCTACTGG
ATGCTGCGTA GCAACACAGC GTATCCGGAG ATCGCTCGCA TCGAGGGCAG CCCGAGGTAA
|
|---|
| Protein sequence | MMIVGCDFHP GWQQVAVFDS ETGEIRELRL HNESGEAERF YRSLPVPTLV GLEACGNTQW
FEDLLDRLGH EVWIGDAAAI RASYVRKQKT DRRDAGHILK LLIEGRFPRL WRPSAAERDV
RQLLIHRDRL VGIRSRVKNG LQHLMLNKGR QMKFKLWSEA GQQQLRELPL EGWAAQRRKD
LLHLLGQITP LIEELNRAVE QAAYANERAR LLMTQPGVGP ITALAYVLTM GDVSRFKRGK
QIGSYLGLIP SEHSSSKRRR LGSISKQGSP FLRMLLVESA QTVTRLDEGF RKQYQHRCHR
KMKAVAKVAA ARRLAVRLYW MLRSNTAYPE IARIEGSPR
|
|---|
| |