| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4376 |
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| Symbol | |
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| ID | 4071794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5186811 |
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| End bp | 5188124 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986409 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_593450 |
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| Protein GI | 94971402 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCC CAACGATTGC ATCGAACGCG CAGCCTCATG TAACCCTCGG CGCCCGCTGG
AAGCGGTTCG GCTTCGGCGA AAATGCGCGC ATGGCGTTCG ACACCCTGCG CAACCACAAA
ATGCGCTCGT TCCTGACCGT GCTCGGCGTG GTCATCGGCG TGGCGGCGCA GATCTTCGTT
GCCTCCATCC TTGTGGGCTT CGATTCCAGC ATGCGCGAGA TGCTGGAGTC CTTTGGCGCG
AACACGCTGT TCATTCAACG ATTCAACCCT GGCATCCACA CCGGCCGGTT GAGCGCGGAA
GAACGCCAGC GCAAGGTACT CACGCTGGAA GACGGCGAGG CGATCAAGGA ACTTTGCCCG
TCGGTGGCGG AAGTGGATGT CGAGATCTTC CAGGACTGGT GGAGCAATCC GCGCAATATC
ACAGCGCGCT CGGGCGGCCA CGAGGTCTTC AGCATCGACC ACTCGGGTAC GCTGCCTACC
TACGAGGTAG TGCACAACGC GCCGACCCAG GAAGGCCGCT GGTTCACCGA TGCCGAGAAT
GAGCATCGCG CCGACGTAGT CGTGATCGGC GCCGGCATTG AGGATGCGCT CTTTCCCGGA
CACGATGCGA TTGGCAAGAA CATCCTGATT GACGGCATCA ACTACACCAT CGTGGGCGTA
CTGGAAAAGC GCAAGCAATA CCTCATCAGC GACGACAGCC AGGACAAGAT CGCAAAAGTC
CCGTACCGGA CTTATCAGAA GCACCATCCC CAGGACCACG AAGGCTTCAT TGCCGCAATG
GCATTCCCCG GCAAGATGGC GCAGGCCCAG GATGAAGTGA CCAACGTGCT GCGCGTGCGG
CGCCGCGTTC CGCCGAACCA GCCCAACAAC TTCGGCATCG ATAGCGCGGA TGCAATCGCC
GATCAGTTCC GGCAGATCAT GTCGATGACG TTCCTGATGA CCATCGTAGT GTCGTCGATC
GGCCTGCTCG TAGGCGGCGT GGGCGTAATG AACATCATGC TGATGTCGGT GACGGAACGC
ACCCACGAGA TCGGCGTGCG TAAAGCCATC GGCGCGAAGA AGGGCGATAT CATCCGCCAG
TTCCTCACTG AAGCCATCGT GCTCACCGGT GCGGGCGGCG TGGTCGGCGT AATTTTCGGC
ATGCTCGGCG CCAAGGGGAT CAGCATGATC TTCACCACGC TAAGCACCTC GGTCCCGCTA
TGGGCGGTCA TCAGCGGAGT CGCCGTCGCA ATGAGCGTGG GATTGTTCTT CGGGATGTAT
CCAGCAGTGA AAGCAGCAAG ACTGGATCCG GTGGAAGCGC TGCGCTACGA GTAG
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| Protein sequence | MATPTIASNA QPHVTLGARW KRFGFGENAR MAFDTLRNHK MRSFLTVLGV VIGVAAQIFV
ASILVGFDSS MREMLESFGA NTLFIQRFNP GIHTGRLSAE ERQRKVLTLE DGEAIKELCP
SVAEVDVEIF QDWWSNPRNI TARSGGHEVF SIDHSGTLPT YEVVHNAPTQ EGRWFTDAEN
EHRADVVVIG AGIEDALFPG HDAIGKNILI DGINYTIVGV LEKRKQYLIS DDSQDKIAKV
PYRTYQKHHP QDHEGFIAAM AFPGKMAQAQ DEVTNVLRVR RRVPPNQPNN FGIDSADAIA
DQFRQIMSMT FLMTIVVSSI GLLVGGVGVM NIMLMSVTER THEIGVRKAI GAKKGDIIRQ
FLTEAIVLTG AGGVVGVIFG MLGAKGISMI FTTLSTSVPL WAVISGVAVA MSVGLFFGMY
PAVKAARLDP VEALRYE
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