| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4335 |
|---|
| Symbol | |
|---|
| ID | 4071753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5143972 |
|---|
| End bp | 5144511 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637986368 |
|---|
| Product | ATP synthase F1, delta subunit |
|---|
| Protein accession | YP_593409 |
|---|
| Protein GI | 94971361 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000408074 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.759858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCG TCACGATCCG ATACGCAAAT GCTCTGGCAG ACGTGGTGCT GAGCAACCGC
TTAGATGTAA CGACGGCGGT ACGCGACCTG AACAACATCG TCAGCATGAC GATCGAGAGC
GAGGATCTTC GAAAAGTTTG GGAGAACCCT TCGATCGCGG TGGCGCAGAA GCGAGCGATC
CTGGATGGTT TGGTTGGGAT GGTGGGAACG CCGCGCATTA TCCGCAATTT CGTTGCGGTG
TTGATTGACC ATCAGCGGGT ACCGCTGCTG CCGCGAATCG CGCGGCAATT CGAACTGGAA
TTGAACCATC GTATGGGCTT CGCTGATGCG GAGGTGACGA GCGTTCACGA GTTGAGCGCT
CAGGACCGCC AGATGATCGA ACAGCAGATC GCAAAGGTGG TTGGGAAGAG TGTGCGCGCG
CGCTACAAGA CGAACGCAAC CCTGCTGGGT GGAGCGATCA TTCGCGTGGG CAGCACGGTG
TACGACGGCT CCATCAAGGG CCAGTTGGCA AAGATCAAAG AACAACTGAG CGCCAGTTAG
|
|---|
| Protein sequence | MASVTIRYAN ALADVVLSNR LDVTTAVRDL NNIVSMTIES EDLRKVWENP SIAVAQKRAI
LDGLVGMVGT PRIIRNFVAV LIDHQRVPLL PRIARQFELE LNHRMGFADA EVTSVHELSA
QDRQMIEQQI AKVVGKSVRA RYKTNATLLG GAIIRVGSTV YDGSIKGQLA KIKEQLSAS
|
|---|
| |