| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4314 |
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| Symbol | |
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| ID | 4071887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5124565 |
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| End bp | 5125842 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986347 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_593388 |
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| Protein GI | 94971340 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.241702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGATCCA CGACATGCAT CGTGGCTGAC ACTCAGCACC AAATCGCGGG GATGGTGGAC
CATCTGTTCC GCACCAGTGC GGGTCAGATG GTCTCGCACC TTACCCGTGT GCTCGGCCCG
GCCCACCTCG ATCTCGCGGA AGAAGCCGTA CAGGATGCGC TTGTGAAGGC CCTGCAAAGC
TGGCCTTTTG GCGGCGTTCC CAACAATCCC GGCGGCTGGC TCATGCAGGT TGCGCGCAAT
CGCGCGCTCG ACATCGTTCG TCACCGCGGA ATGGCCGCCG AGAAGACCGG AGAAATCGTC
GCAGAACTTA CCCGCGCCAA TCCAACCGGT GACATCGAAG TGCGCGACCA GTTTCGTGAC
GACGAGTTGC GCATGATCTT CCTTTGCTGC CATCCACTGA TTTCGCGCGA TGCCCGCGTT
GCGCTCAGTC TTAAGACGGT CAGCGGTTTC TCGATCGAGG AGATTTCTCG CGCGTTCCTC
GCCGATCCGC CAACCATTGC GCAGCGCCTG GTGCGCGCCA AGCGGCAGAT ACGCGACGCC
AACATCCGCT TCGATCTTCC GCCGCGTAAA GAACTTTCCG AGCGGCTCGA TTCCGTTCTC
GAAGTGATTT ACCTGCTCTT TAACGAAGGC TACACGGCAC ACGCCGGCGA TGACCTGGTG
CGGCAAGACC TTTGCGTGGA AGCCCTACGT CTCGCCATGT TGGTGGCGGC ATCGCCGGTA
TCGCAACCGC GCGCCAACGC GCTGGTCTCG TTGCTGGCGT TCCAGGCCGC TCGCCTTCCC
GCCCGTGTCG ATGACAAAGG CGAGTTGGTT CTTCTCGAGG ACCAGGACCG CAGCAAGTGG
GACCAGAACT TAATCGCATT CGGTTTCCAC GAGATCGTGA AGAGCGCGCA AGGACAGGCC
GTGTCTACGT ATCACATGCA GGCCGCGATC GCATCCATTC ACGCCCAAGC CAAAGACACT
GCCGGCACCG ACTGGCCGAA GATCCTCATC CTTTACGACG ACCTGATGGC ACTGAATCCC
TCAGCGATCA TCGCGCTGAA TCGGGCGATC GCCGTGTGGC GGGTCCACGG CGTTGTGGCG
GCAATGCGCG AAGTGGACCA AATCGCCCAC GAACCAGCAC TCGCCCACTA CTATCTTCTT
CCCGCCACTC GCGGACGCCT CCTCCTCGAA ATCGGCGACC GTACGGCAGC AGCCGAGTGC
TTCAGCGAAG CACTCAATCG CAAGTGCTCG GAACCGGAGC GCCGGTTCTT ACTGCGACAG
CTGAAGGAAT GCGAATAG
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| Protein sequence | MRSTTCIVAD TQHQIAGMVD HLFRTSAGQM VSHLTRVLGP AHLDLAEEAV QDALVKALQS
WPFGGVPNNP GGWLMQVARN RALDIVRHRG MAAEKTGEIV AELTRANPTG DIEVRDQFRD
DELRMIFLCC HPLISRDARV ALSLKTVSGF SIEEISRAFL ADPPTIAQRL VRAKRQIRDA
NIRFDLPPRK ELSERLDSVL EVIYLLFNEG YTAHAGDDLV RQDLCVEALR LAMLVAASPV
SQPRANALVS LLAFQAARLP ARVDDKGELV LLEDQDRSKW DQNLIAFGFH EIVKSAQGQA
VSTYHMQAAI ASIHAQAKDT AGTDWPKILI LYDDLMALNP SAIIALNRAI AVWRVHGVVA
AMREVDQIAH EPALAHYYLL PATRGRLLLE IGDRTAAAEC FSEALNRKCS EPERRFLLRQ
LKECE
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