| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4309 |
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| Symbol | |
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| ID | 4071882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5120125 |
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| End bp | 5120898 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986342 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_593383 |
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| Protein GI | 94971335 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.313012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACC TATTCAATCT CTCTGGCAAG GTGGCTGTCG TTGTGGGAGG CACAACTGGC
ATCGGACGCG CCATCAGCTT CGGCCTCGCC GATGCAGGTG CCGACGTTGT CTCCACCGCT
CGCCGAGAAG AACAAGTGAA TGCCGCGGCC GACGAAATCG AGCGGCGTGG AAGACAGACG
CTGCGCGTTT GTTCGGACGT AACCAGCCGT GCGTCAATCC AAAGTTTATG CAATGCGGTA
CTCGCGAAGT TTCAGAAGGT CGATATCCTC GTAAATTGCG CCGGCACAAC CAAGCGCACG
CCGACACTCA CCGTGTCGGA AGATGAATGG AACAAGATCC TCGACACCAA CCTCACTGGC
GCACTCCGCG CATGCCAGGT CTTCGGTAAG CACATGATCG AGCGCGGCTA TGGAAGGATC
ATCAACATCG CGTCGTTGAG CAGCTTCGTT GCTTTGCACG AGGTTGCCGC CTACTCCGCT
AGCAAGGCGG CGCTGTTGTC GCTCACGCGT TCGCTCGCAG TGGAATGGTC GAAAAAGGGC
GTGACCGTGA ACGCGATCGC CCCCGGAGTG TTTCGGACTG CCTTGAATAC TGAATTGCTC
GACAACACGC CTCGCGGTCA GGAATTCCTA ATGCGCACGC CGATGCAAAG ATTTGGTAAC
ACGGAGGAGC TCGTCGGAGC CGCGGTTTAT CTGGCCTCAG ATGCAGCATC GTTCGTGACC
GGTCAAGCGA TCACGGTGGA TGGCGGGTTC CTCGCAAGCG GCGTCAACCA ATAA
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| Protein sequence | MADLFNLSGK VAVVVGGTTG IGRAISFGLA DAGADVVSTA RREEQVNAAA DEIERRGRQT
LRVCSDVTSR ASIQSLCNAV LAKFQKVDIL VNCAGTTKRT PTLTVSEDEW NKILDTNLTG
ALRACQVFGK HMIERGYGRI INIASLSSFV ALHEVAAYSA SKAALLSLTR SLAVEWSKKG
VTVNAIAPGV FRTALNTELL DNTPRGQEFL MRTPMQRFGN TEELVGAAVY LASDAASFVT
GQAITVDGGF LASGVNQ
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