Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4250 |
Symbol | |
ID | 4073177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5043799 |
End bp | 5044566 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637986282 |
Product | hypothetical protein |
Protein accession | YP_593324 |
Protein GI | 94971276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00701403 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.803434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTC CGCGAGTCTG TATGACAGTC CTCCTATTAA CTTCTGGGTC ACTGTTGTTT TCGCAGTCCA CTTCGAGTTC GTCGCTCACC ACGGGCGCGG TACTGTCGAA CGCATGGAAT GCGTTCTCAG GCGGGAAACC AGTCCACTCG ATTCAGATCA GTGGTAATGC CTCCTCGCAA TTGGGTCCAG ATTCTCAAAG TGGCTCAATT TCGGCCACCG CTGCCACGGA CTCCACGATC TCACTTCAGC GAACGACCGG CACCGGGGTA GCCACCGAGA TCAAGGCGAG CACGAACGGC GTGTTTCAGT GCGCATGGAC ATCCGCTGAC GGGATCCAGC ACGCCATCCC GCAGCACAAT TGCTGGCAAC CGGTCCCGTG GTTTGCGCCC TTCCTAGCTA CTGAGTACGG TCTCACGCCA ACAAATCTGG GCGTTACATA CATTGGGCAC GAGACGCTCG GTTCGCAAGG CGTAGAGCAC CTTCAGTTTC AGACTGTTGT TGGAAATGCG CAAACACCGG CAAACTTCAC AACGTTGGTT CAGGCGGCCA GCACTGCTGA TCTGTACCTC GACAGCAGTA CTTTTCTTCC GGTCGTGCTC CGCTATCCAA CCCATCCTGA TCAGGATGCG AATACCATCA TTTCCATCGA GGTACGATAC TCGGCTTACT CTCAGCTTTC AGGCCTAACT ATCCCGACGC ACATCGAGAG AGCCGTCAAC GGCAATGTGC AGGACGTTGT CGACATCAAT AGCGCACTTT CCAACTGA
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Protein sequence | MNLPRVCMTV LLLTSGSLLF SQSTSSSSLT TGAVLSNAWN AFSGGKPVHS IQISGNASSQ LGPDSQSGSI SATAATDSTI SLQRTTGTGV ATEIKASTNG VFQCAWTSAD GIQHAIPQHN CWQPVPWFAP FLATEYGLTP TNLGVTYIGH ETLGSQGVEH LQFQTVVGNA QTPANFTTLV QAASTADLYL DSSTFLPVVL RYPTHPDQDA NTIISIEVRY SAYSQLSGLT IPTHIERAVN GNVQDVVDIN SALSN
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