| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4249 |
|---|
| Symbol | |
|---|
| ID | 4073176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5042322 |
|---|
| End bp | 5043380 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637986281 |
|---|
| Product | peptidase M12A, astacin |
|---|
| Protein accession | YP_593323 |
|---|
| Protein GI | 94971275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.150684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.841288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCC GATCACTCTG CGGCTTGATG TTAGTAGTCG TGGTTGCATC CACGTTGTTT
GCCCAAGAAA TCGCCGGCCG GCTTCCCACT GTCGAGTCAC TGCCGGACCG CGTGCAGGCA
CGCATTGAGG TCAGAACGAG AGCGGCTGGA AATGCGCACA ACGCCGGTCG CTTTGGCATG
CAGTACTTCA TGTTCATTAC AAAACGTTGG CCGAATGCAG CGAGCACGCC GATTACCGTG
GCGTTCCTTG GCGGCGATCG TCAACTGCGG CAGCGCATCC AAGACACCGT TACGGAATGG
AGTCAGGCTG GCACGCTGAG GTTTGATTTC ATCGATCCGG CGTCCCACAC CTTCCGCGAG
TGGTCGCGCT CTGACACCAG TTTTAAAGCA AACATTCGGG TAGCATTCGA CGGCTCTGAA
GAAGCGGGCT ACTGGTCTAT GATCGGCGTC GACAGCTCCG ACCCAACGAT CATCAAGCCG
GGTGAGGCAT CACTGATGTT GCAAGGATTT ACGACACTGC TGCCGCAGGA CTGGCAGGCG
ACGGTCCGTC ACGAATTTGG CCACGCGCTC GGGCTTCTCC ATGAACACCA AATCCCAGTG
GGCGGGTGCG ATCAAGATTT TCGATGGGAG GACGATACCG GCTACGTGCC CACTCAGGAC
TCCTACGGAC AGTACATTAC CGATGCCCAA GGTCGGCGAC CCGGCATCTA CACCTTACTC
GCAGGCGCAC CGAACTTTTG GCAAAAGGAC AAGGTCAATA GCAACATGAG GCAGCTCGCA
ACTGACTCCC ACAATAAGGA CTTCGGGGCT TTCGATGCAA AGTCAATCAT GAAGTATTAC
TTCGACCCGT CGTTCTTTCG CGACGGAACA GCTGCCCATT GTTACAGCGA CGAAAATTTG
ACGATCTCAG ACGAGGACAA GCAGGGCATA GCGAAATGGT ATCCACCATT CGGCTCTCAG
GAACTGAGCA ATCTACTCAA ATTGCAACAG GACACTATGC GACAACTTGC GCCTGTGCAC
AACATGCAGC AGGTTCAGAC GCTTCAGTCA ATCAAGTAG
|
|---|
| Protein sequence | MFTRSLCGLM LVVVVASTLF AQEIAGRLPT VESLPDRVQA RIEVRTRAAG NAHNAGRFGM
QYFMFITKRW PNAASTPITV AFLGGDRQLR QRIQDTVTEW SQAGTLRFDF IDPASHTFRE
WSRSDTSFKA NIRVAFDGSE EAGYWSMIGV DSSDPTIIKP GEASLMLQGF TTLLPQDWQA
TVRHEFGHAL GLLHEHQIPV GGCDQDFRWE DDTGYVPTQD SYGQYITDAQ GRRPGIYTLL
AGAPNFWQKD KVNSNMRQLA TDSHNKDFGA FDAKSIMKYY FDPSFFRDGT AAHCYSDENL
TISDEDKQGI AKWYPPFGSQ ELSNLLKLQQ DTMRQLAPVH NMQQVQTLQS IK
|
|---|
| |