Gene Acid345_4238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4238 
Symbol 
ID4073165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5024933 
End bp5025859 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID637986270 
Producthydrogenase 2 protein HybA 
Protein accessionYP_593312 
Protein GI94971264 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCA CCCGGCGAGA ACTGATCACG AACATCGCCA AGGCCGGTGT CCCCGCTGCC 
CTGGCCGTCA CTGCCTGCGC TCCCAAACTC GAGGCCGAGA CGGTTCCGGT TCCGAGCGGC
GCGGTCGGAC TGCTCTACGA CGCCAGCATC TGCATTGGCT GCAAAGCGTG CGTGGCCGCT
TGCGCAGAGG CAAACGATAC TTCGCCCGAT ACCCGCGGCG ACGGACTGCA CCAGGCTCCC
AACGACTTGA ACGACCGAAC TCGCAACATC ATCAAGCTGT ATAAGCCCGC AGGTGGCGGC
CCTAGTTCCT ACGTGAAGCG CCAGTGCATG CACTGTCTCG ATCCAGCTTG CGCCGCAGGC
TGTCCCTTCC AGGCCCTCAG TAAAGATCCC GAGACCGGCA TCGTCACGTG GACGGAAGAC
AAGTGCATCG GTTGCCGGTA TTGCACGATT ACCTGCCCGT ACCACATTCC ACGCTTTCAA
TGGGCGGGTT ACAACCCTCG CGTCACCAAG TGCGAACTCT GCAACACACG TCTCGATAAA
GGACTGAAGC CGGGCTGCAC CACGGTGTGT CCGACCGGAG CCGTGATCTT TGGTCCGCGT
CCTGCGCTCC TGATGGAAGC CAAGAGCCGG ATCACAAAGA GTCCGAACCG TTACTACCAG
AACCGCGTTT ATGGAGAGGT GGATAACGGC GGCACCCAAG CGCTGTACCT CTCGCACGTA
CCGTTCGAGA AACTCGGCCT TCCGGAAATC GGTCCCGACT CTGTGCCGGC GAAGACTCTG
CGCTGGCAGC GCCGTTTGTA TCAGTACTTC GCGTTGCCCG CAGTTCTATA TGTGGGATTA
GTACAAGTTA TCCGCAAGAG TCTGACCGGC CACGAAGTAG AAGCTCATGA GCGCGAGAGA
GCCACTGGAT TGAGGGCACA ACGATGA
 
Protein sequence
MAITRRELIT NIAKAGVPAA LAVTACAPKL EAETVPVPSG AVGLLYDASI CIGCKACVAA 
CAEANDTSPD TRGDGLHQAP NDLNDRTRNI IKLYKPAGGG PSSYVKRQCM HCLDPACAAG
CPFQALSKDP ETGIVTWTED KCIGCRYCTI TCPYHIPRFQ WAGYNPRVTK CELCNTRLDK
GLKPGCTTVC PTGAVIFGPR PALLMEAKSR ITKSPNRYYQ NRVYGEVDNG GTQALYLSHV
PFEKLGLPEI GPDSVPAKTL RWQRRLYQYF ALPAVLYVGL VQVIRKSLTG HEVEAHERER
ATGLRAQR