Gene Acid345_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4195 
Symbol 
ID4072154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4970270 
End bp4970740 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID637986226 
Productcyclic nucleotide-binding protein 
Protein accessionYP_593269 
Protein GI94971221 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.221197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0287299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAC CGATTCATAT CCCCAACCAA GCCTTTGTTT CCCCACCCGA GCTCGTGGAC 
GAGCTCAAGC CCCTAGGCCA CGAGATAACC GCCGTGCGGG GCACCATCCT CTTTCATGAA
GGGGATCCGG CCAAAGGGGT CTACATCGTG CTCCAGGGAC ACGCCTCCCT GACCATGAGC
ACCGAGAATG GCAATACCGT TCTCGCTCGC AGCTCTGGCC CTGGAAGCCT GCTGGGTCTG
CCGGGCACTT TCTTGCGCGG CATTTATCAA CTGACCGCCG AGATCGATGA AGACTCGCGC
CTCATCTTCG TGGAACGTGA GAAGGTCCTC GAGTTCCTTC GTCAGCGCAC CGACCTCTGC
ATGATCGTTC TCAGTGTCCT CGGCAACGAG GTCTCGCAGA TGCCGATACA ACCGGTTCAG
CCGAAGCGCC GCGCTTCAAG AAAGCAACAG CAAGCCGCGC GCCTGGCCTA A
 
Protein sequence
MTQPIHIPNQ AFVSPPELVD ELKPLGHEIT AVRGTILFHE GDPAKGVYIV LQGHASLTMS 
TENGNTVLAR SSGPGSLLGL PGTFLRGIYQ LTAEIDEDSR LIFVEREKVL EFLRQRTDLC
MIVLSVLGNE VSQMPIQPVQ PKRRASRKQQ QAARLA