Gene Acid345_4190 details

Gene Information

• Locus tag: Acid345_4190
• ID: 4072149
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: -
• Start bp: 4959572
• End bp: 4962916
• Gene Length: 3345 bp
• Protein Length: 1114 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637986221
• Product: TonB-dependent receptor
• Protein accession: YP_593264
• Protein GI: 94971216

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.351423
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACCAC AATTTGGTAA GCGAAGAGCG GCATTCGTTA GTGTTCTGCT ATTCGCACTT 
ATCTTTGCTG TTTCTGCGTG GGGCCAAACG AGTAAAGGAA TCATCGCTGG AACAGTCACA 
GATACGAGCG GAGCCGTTGT CGCCGGAGCA CAGGTAACAG CGTCAAACAC GGATACCGGC 
GAAACACGCA CCGTTCAGTC GGGACCGACG GGTGCGTACC GCGTTGAGGC AGTCACACTC 
GGCAAATATC GCATCAACGT ATCGTTCCAG GGTTTTCAGA GCCAGGTTAT AAATGGCGTT 
GAGGTTGCCG GATCGGTGAT GACTGCGGTT GATATCAAAC TGCAAGTCGC CAGCGCCGCC 
AGTACAGAAG TGACGGTATC GGCGGACAAC AACCAGGTGC AGACCGAAAA TGGCGAGATC 
TCCAGCACGA TCACTACGAA AGAATTGACC AATCTACCGC TCGCCTCCCT GAACCCGATC 
GAACTAGCAC TGACGCAGCC CGGCGTTATA GACAATGCCG GCCGTGGAAG CACGAACGGC 
ATGGGTTTCT CGGTGAACGG TTCACGTCCA CAGAGCAACA ACTTCCTGAT TGATGGTCAG 
GACAATAACG ACAACAGCAT TCAGGGCCAG GCGTATCAGC CACAGAATCC GAACGCAGTG 
CAGGAAGTCG CCATCATGAC GAACTCCTAC TCCGCGGAAT TCGGTCGTGG CGGAGCTTCG 
GTCACCAACG TTATTTACAA GAGCGGCTCC AATCAGTTCC ACGGAACGCT GAGCGAACTC 
TACTCGGGCT CCGGATTGAA CGCGATCGAC GCCGCCAACG GCCTTACTGG AATGAAGGAC 
GGCGGCGATT GCAACCGAGC GCCGAATTTC TTCCCATGTA AGACGCGTTT CGACTCCCAC 
ACCTTCGGAT TTACGTTCGG CGGTCCGCTC ATTAAGGACA AGCTGTTCTT CTTCGGCAGC 
GGAAACTGGG AGCGCACCTA CGGTCAGGAG CAGAACAGCA ACATTCTGAT CCCCACTGAA 
ACCGGCATCG GCCAGTTGCA GGCGTATGGA TCGGCGAACG CGACTCTTCT GACCCAATAC 
CTCGGATCTC TCCGCGGATC TACGGTTGGA GCGACGTGCG TCAACACTGG CATTTCGTCG 
TTGCCTTGCG TAGAGATGGG CAATTACACG CCGACCGCGC CGCAGCAAAA CACTGACACG 
CAGTGGAACA TCAAGGCGGA CTATCTGCCG CGGCAGACCG ACACCATTAC CTTCAACTAT 
CTCCACGACC GCGGCTACTT CGCGCCTGAC TGGTTCGCGA ATCCGGGTTC CGTATTGCCA 
GGCTTCGAAA CCTTCCAGGG CGGACCGTCG TGGATCGCGG GCGCTTCGTG GACGCACACC 
TTTAGCTCGA ACAAGGTGAA CGAATTCCGC GCGTCCTACG GACACCTCGG CTTCACGTTC 
GGACCTACGG CCGCAACTAC AGGGAATCCG CTTTATCTAA TGCCGAGCCT GGCACTGAGC 
AGCGCCGGAT TGGATGCATT CCCGCTATTG GGTACTGACT CAGCTTTCCC GCAGGGTCGT 
AGCCACCGCA CCATGCAGTT GCAGGATGGC TTCACCATTA CGAAGGGCAG CCACACCTTC 
AAGATGGGCG CGGACGTCGC GCGCATCTGG GTGACGGACC AGATTCCAAT CAACACCCGC 
GGAACTCTGA CCTTCACCGA TGGTGGCGGC TACACCGCAC TCGGCAACTT CCTCGATAAT 
TTCACCGGCA CCAGCGGCCA GGCGTTGGAT CTCCAGACAG GTAATCCTAC GGTGAAGCCC 
ACGTTGCTGC AGAGCGGCTA CTACTTCCAG GACAACTGGA AGGTGCGGCC GAACCTGACG 
TTGAACCTCG GCGTCCGTTA CGAGTATCAA ACGAATCCCG AGAACTCACT CCCGTACCCG 
GCGGTGTCGA ACATCTACGG CGGCGATAAC AATTTCCCGA CGGTGGTGAA GGCGGACCAG 
CAGTTCTCGC ACATCGCTCC TCGCATCGGG TTTGCCTACT CGCCAAACTT CCTGCCAAGC 
ATCTTCGGAA ACGGCAAGAC CGTTCTCCGC GGCGGCTTCG GCATTTTCTA TGATGCGATC 
TACACCAACA TTCTCGATAA TACGGCCTCG TCCGCACCGA ACTCGATCGA CGAGCCGCTG 
TTTGGCTCGG ACTCTTCGAA CGCGCGCGGT TTCGCCAACG CAACCGGACA GTTCAGCGGA 
CTCTCAGGTA CCTTGAGCCC GTTCAATACC GTTACAAGCA TTGCGAAGGA CCTCACCAAT 
CCGCGTACCA CGCAGTGGAA CTTCAACATT GAGCGTGAAC TGCCGGCAGA CATGCTCCTG 
ACGGTCGCCT ACCTGGGATC GCGTGGACAG AAACTGTTGG TGAATGACGA CTACAACCCC 
TTCGGCGGCT ACGATGCCAG CGGCAACTAT ATTCCGCGCT TCAATTCGAA CCGCGGTGCC 
ATGGCAATTC GCACCAATGG CGGTGATTCC TACTACAACG GCCTGGCAGT TACGGTCGAG 
CGCAGGTTCT CTCATGGCTT GATGCTGCGC AGCGCATATA CGTTCTCGAA GTCCATTGAT 
GACAGCTCGA ATATTTTCGT CATCACGGGC GGATCGTCGT ATGCGCAGGA CCCAACCAAC 
CGCCAGGCGG ATCGTGGTTT GTCAGCCTTC AACGCGTTCC ATCGTTGGGC GTTTACCTAC 
GTGTGGGACG TACCGGGCTT CAAGGCGCAG GACAACAAAG TGCTGAACGG CCTCGCGTAC 
CTCTCCCGTC ATTGGGAATG GACCGGGACC ACGACCCTGC AGTCTGGCTT GCCTGACACG 
ATCTACGATA GCTTCGATAG CAGCGGTCGC GGCCACAGTT CGAGTGGACG TCCGGACCTG 
TTGAACGCTT CGGCGCCCAT GAATGCGATT GCTTTGCCGG CAGCGTGGGG AGCTTGCGCA 
CCGGGCGCGG ATTACTGCGA CCTGGCGACG CTGAACTCGC TCTCTGCCAG CGACCTGAGC 
AACTATCATT TCCTGGTTCC GTTTGGCGCG CCGGGTACGG TGGGACGCAA CAACTACATC 
CTGCCTGGCC AGGTGAACTT TAACTTCGGA ATCAACCGCA ACATCCCGAT TCCGCGTCAC 
GAATCGCAAG TGGTGACGCT GCGCGTGGAA ATGTATAACC CGTTCAATCA CCCGAACCAG 
TCGGCACTTC CGAACCAGGG CATGTGGAGC ACGAACGTCT CTGACATGTT CCTGGTTGGA 
CAGGACTCGA GTGGGAACCT CAACAACCCG AGCCACCTGT TCGACACCTA CTGGGCACGC 
CAGGGTGCGC GCAATATCAA GCTGTTGATC AAGTACCAGT TCTAG 

 

Protein sequence

MQPQFGKRRA AFVSVLLFAL IFAVSAWGQT SKGIIAGTVT DTSGAVVAGA QVTASNTDTG 
ETRTVQSGPT GAYRVEAVTL GKYRINVSFQ GFQSQVINGV EVAGSVMTAV DIKLQVASAA 
STEVTVSADN NQVQTENGEI SSTITTKELT NLPLASLNPI ELALTQPGVI DNAGRGSTNG 
MGFSVNGSRP QSNNFLIDGQ DNNDNSIQGQ AYQPQNPNAV QEVAIMTNSY SAEFGRGGAS 
VTNVIYKSGS NQFHGTLSEL YSGSGLNAID AANGLTGMKD GGDCNRAPNF FPCKTRFDSH 
TFGFTFGGPL IKDKLFFFGS GNWERTYGQE QNSNILIPTE TGIGQLQAYG SANATLLTQY 
LGSLRGSTVG ATCVNTGISS LPCVEMGNYT PTAPQQNTDT QWNIKADYLP RQTDTITFNY 
LHDRGYFAPD WFANPGSVLP GFETFQGGPS WIAGASWTHT FSSNKVNEFR ASYGHLGFTF 
GPTAATTGNP LYLMPSLALS SAGLDAFPLL GTDSAFPQGR SHRTMQLQDG FTITKGSHTF 
KMGADVARIW VTDQIPINTR GTLTFTDGGG YTALGNFLDN FTGTSGQALD LQTGNPTVKP 
TLLQSGYYFQ DNWKVRPNLT LNLGVRYEYQ TNPENSLPYP AVSNIYGGDN NFPTVVKADQ 
QFSHIAPRIG FAYSPNFLPS IFGNGKTVLR GGFGIFYDAI YTNILDNTAS SAPNSIDEPL 
FGSDSSNARG FANATGQFSG LSGTLSPFNT VTSIAKDLTN PRTTQWNFNI ERELPADMLL 
TVAYLGSRGQ KLLVNDDYNP FGGYDASGNY IPRFNSNRGA MAIRTNGGDS YYNGLAVTVE 
RRFSHGLMLR SAYTFSKSID DSSNIFVITG GSSYAQDPTN RQADRGLSAF NAFHRWAFTY 
VWDVPGFKAQ DNKVLNGLAY LSRHWEWTGT TTLQSGLPDT IYDSFDSSGR GHSSSGRPDL 
LNASAPMNAI ALPAAWGACA PGADYCDLAT LNSLSASDLS NYHFLVPFGA PGTVGRNNYI 
LPGQVNFNFG INRNIPIPRH ESQVVTLRVE MYNPFNHPNQ SALPNQGMWS TNVSDMFLVG 
QDSSGNLNNP SHLFDTYWAR QGARNIKLLI KYQF