Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4169 |
Symbol | |
ID | 4072128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4935554 |
End bp | 4936462 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986200 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_593243 |
Protein GI | 94971195 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.429609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCATCA AGATCACCAC GCGCCGCAAA GCCGTTGGCA CGGCCCTCAC GCTGGGCATC CTGCTCATCG CCGCCGCGGT CACGCTCAAC ATCAGTTGGA TCATCCTCAA CTGGCGCGAG TTCTGGATGC TGCTCATAGG AGGCATCTTC TTCCTTGTCA TTATCGCGGG CATGATCCTC AACACGATCT TTCTCGTCCG CGAAATCCGC CGCAACGAGC AGCACGACAG CTTCATCAAT GCCGTTACCC ATGAACTGAA AACGCCCATC ACTTCCATCC GCCTCTATCT CGAGACACTA AAGAAACGCA GCGTGGATGA AGAGAAGCGC AAACAGTTCT ACGACATCAT GCTCGACGAC ACCGATCGCC TCCTCCGCAC CGTCGAGCAA GTCCTCAAAG CCGGATCGCT CGCGCAGAAG CGCGAAGTCC AGAACTTCAA GCCCATCGAG ATTGAGCCCA TCCTCCGCGA CTCCATGGAA CTCGTCGCCA CGCGGAATCA CCTCGCGCCC GAGTTGCTCC ACTGGCAGAT CGAGCCCATA CCAAACGAGC ACTATACGGT TCTCGGCGAC GCCGAAGAAC TCCGCACTGC TTTCCTCAAT ATCCTCGATA ACGCAGTGAA GTACTCGCGC GAGAAGGTCG ACATCGGTGT TTCGCTCGTT GCGCCGACGA TTGATCAAGT GGAAGTCCGC GTCACCGACA AAGGCGTCGG CATCCCGCGC GGCGAACTCA AGCGCATTTT TAAGCGCTTC TACCGCGCCG CGAATCCCGG TGTGAAAGGA ACTGGCATCG GATTGTTCAT CGTGCGCGCG ATCGTAAAAC GGCACGGCGG AAAAGTCAGC GCCGCCAGTG AAGGCGCAGG CAAGGGAACC ACGGTTACAC TGGAACTGCC ACGGATATTC ACCACATGA
|
Protein sequence | MPIKITTRRK AVGTALTLGI LLIAAAVTLN ISWIILNWRE FWMLLIGGIF FLVIIAGMIL NTIFLVREIR RNEQHDSFIN AVTHELKTPI TSIRLYLETL KKRSVDEEKR KQFYDIMLDD TDRLLRTVEQ VLKAGSLAQK REVQNFKPIE IEPILRDSME LVATRNHLAP ELLHWQIEPI PNEHYTVLGD AEELRTAFLN ILDNAVKYSR EKVDIGVSLV APTIDQVEVR VTDKGVGIPR GELKRIFKRF YRAANPGVKG TGIGLFIVRA IVKRHGGKVS AASEGAGKGT TVTLELPRIF TT
|
| |