Gene Acid345_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4162 
Symbol 
ID4072121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4928625 
End bp4929071 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID637986193 
ProductArgR family transcriptional regulator 
Protein accessionYP_593236 
Protein GI94971188 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00922797 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGC TCTCCCGGCA CGCCGCAATT CGCGACGCCA TCACCAGCCA TCCTGTGCAG 
AACCAGGATG AGCTGCGCCG GCTGCTGTTC AAGCGCGGAC ATCGTGTAAC CCAGGCCACC
CTCTCTCGCG ACATTCACGA ACTCGGCCTC GTCAAAACCG GTGAGGGCTA CCAGTTCCCA
TCTTCCGAAG ATGACTCCAA TGCTGCCTGG CTTCCCTCCG TCGAGCGTCT CATCCGCGAG
TTCGTATACG ACGTGAAGAT CGCGCAGAAC ACCGTCGTAG TGAAGACCAG TGCCGGCAGC
GCCCAGCCCG TGGCCGCAGC GCTCGACGCC GAAGGCTGGC CCGAAGTCGT GGGCACCGTC
GGTGGCGACG ACACCATCTT CGTCGTCACC CCAAGCAACA AGGACGCCGA AAAGCTCCAG
TCCCGCATCA AGGAGCTCAT CGCCTAA
 
Protein sequence
MSKLSRHAAI RDAITSHPVQ NQDELRRLLF KRGHRVTQAT LSRDIHELGL VKTGEGYQFP 
SSEDDSNAAW LPSVERLIRE FVYDVKIAQN TVVVKTSAGS AQPVAAALDA EGWPEVVGTV
GGDDTIFVVT PSNKDAEKLQ SRIKELIA