| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4154 |
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| Symbol | |
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| ID | 4072113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4915939 |
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| End bp | 4919559 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986185 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_593228 |
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| Protein GI | 94971180 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.592663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGTC TAAGAGCGTC GAGGTCGCCT CTTGGCCGAC GCCGTGGCCC CTGGGCCAAG
GCATCTAGCC TAATTCTTCT CATCACCGTT CTAACTTTCC TTTCCACCCT CTCCTTCGCC
CAAGTCACTT CCGGCACCAT GTTCGGAGAT GTCACAGACC CCAGCGGCGC GGTGATTCCC
GGCGCAAAGG TGACCGCGCA CGCCGACTCG ATCGGCGTCA CCCGTACGGT TACGGCTTCC
GGCACCGGCG AGTTCGTCAT TCCGAACCTT CCGCCTGCCA CATACACCGT CACTGTGGAG
TCCAAGGGTT TCAAGGCCCT TAAGAAGGAA GGCGTCATCC TCAATGCGGC TGACAAGTTA
AACGCCGGCC AGTTCGCCCT TCCTGTCGGC ACCACCGATA GTCAAGTTAC TGTTACCGCC
GACGCCGCAC AGCTCCAGCT GCAGAGCAAC TCCGGCGAGC GCTCCGATAT CATCACCAGC
AAGCAGCTCA ATGAAGTCGC ACTCAACGGG CGCAACGTCC TCGACTACAT GAAGCTCGTC
CCCGGCGTTT CCGGCATGTA TGACGGTCAC GCCTCCGGCA CCGGCGGTAA CGACGCCTTC
AACATCAACG GCACCCGCGC CAATCAGCAC GAGTACACGA TTGACGGCGC TTCTAACGTG
GATACCGGCA ACAACGGTGG CACCCACATC ACTATCAATC CCGACGCCAT CGAGGAAGTG
AAAGTCCTTA CCTCGAACTA CCAGGCCGAA TACGGCAAAG CCGCCGGCGG ACAAATTGCC
CTTACCACCA AGTCCGGGAC CAACGATTGG CATGGCAATG GCCGCTTCTA CCATCGTCAC
GAAGGCCTGA ACGCCAACGA ATATTTCAAC AAGCAAGCCG AACTCGCCGC AGGAAGCGAT
AACGAACCAG CCAAGTATCG CTACAACTAC GTGGGCTACT CCATCGGCGG CCCGGTCCTC
AAGAACAAAC TGTTCTTCTT CTGGAACCAG GAGTACTACC GCCAGTACGT TCCCCTTGGC
AACACCATCC AGGCTTACGT CCCAACTGCC CTCGAACGGC AGGGCGACTT CTCACAATCG
GTTCGACCCG GAACGGATGC CAGCGGCAAC GCCATCTCCG TTCCCGTGGA GATCTCGGGG
CCCGGCATCG TCGGCAACAA GATCAATCGC GATGCCCTTA CGCCCGCCCA GCAGTCCACC
TTCGACAACA TGCAGAAGAT CCTGAACCTG TACCCGATGC CCAACGTCCC TGGCTTTGCC
GTAAATGGGC AGCAGTACAA CTATTCGACC CTGCCCTCCG CGCCCGATCC GCGCCGCGAA
GACATCCTTC GTATCGATTG GCAGATCAAC AATGCGAACC GCATTTATGG TCGCTGGGCA
CACAATGCCG ACACCATGAC CGCGCCTTAT ACGCCGTTCC CCGGCCCGTT CGGTATCTTC
GCCTGCTCGG CTCCAGAGTT TAACGGCGGA TGCACCCAGA AGCACCCCGG CTGGAACTTC
TCCGTCAACC TCGTTAGCAC CATCACCCCG ACCGTGTTGA ACGAGTTCTC CATCGGTCCC
AGCCACACTC TCTCGCTGGC GGAATCCAAC GGCGGTATTT CTTCCTCGGC GCTTGGCGTC
AACCTTCCGG TTCTCTATCC GGGACTCACC GACACCATTC CTGACGTCGC CTTCAACGGT
ATGAACAACG TGGCGTTCTC CAATCCTTAT CTCGGCGCCA CCCCGTGGAA ACAGGCGAAT
ACGACGATCA ACGTCAACGA CAACCTGACT TGGTCCTACA AGAACCATAC GTTTAAGACC
GGCGTCTTCT ACCAGCGGAA CCGCAAAGAC CAGATTGCCT GGGGAAACAT CAACGGACAA
TTCGGCTTCG ATTCCGGCCA GACCGCACCT TCGGGTTGCG ACAGTAATTC ACTTCAATGC
GGCGACCCGA TCGCCAGCGC ATTGCTCGGT CAATTCCAGA GCTTTAGCCA ATCCACCGCC
CGTCCCGTCG GCAAGTTCCG CTACGACCAA TGGGAACTTT ACGTTCAGGA CACCTGGAAA
CTCACACCAA CCTTCACCCT CGACTACGGC ATGCGTTTCG CTTACATCCC GCCGCAGTAC
GACGCCAATA TGCAGATCGC CCTGTTTGAT CCCAACGCCT ACAATCCCGC CAACGCTGTC
GAGTTGGACG GCGGCGGCAA CATCATGCCC GGTACGGGCG ATGTGTACAA CGGCATGCGG
TTCACCAAAA TGGGCGACCT CCCGGCTGGC GGTTGGGGAT CGCGCGGCTT CATGCCTGAA
CCGCGCATCG GTTTCGCGTG GGATCCGTTC TCTAACCACA AGACGGTCCT TCGCGGCGGC
TTCGGCATGA TGCACGACCG CGTTCAAGGC AACCTCATCT TCAACCCAGT CTTTAATAAT
CCGGTCACTG TCAGAACCGC ATCCTTGGGT TCCGGAAGCA TTGAGCAGTT CGGCGGAGCG
CCCGGCTTTG GCAATGGAGT TCTCGGTGGC GTGATCGGCG CCGATCTCTC CGGCAAGGTA
CCCACCGTCT ACAGCTTTAG CCTCGGCGTC CAGCGCGAGA TTGGGTGGGG CTCCACCATT
GACGTCGCCT ATGTCGGTTC TCTGTCTCGT CACCTCGTTA CCTCGCACGA CATCAATGCA
GTGCCCTACG GCGCAGCGTT CGAACGCCAG AACCAGGACC CCAACTGCGA TCTGAGTTAT
GAAGGCGGGC CGAACTTTGG CGGTACCGTG CCGAATGTGG AACCCAACCT CAATCCGATT
TATACCGCAG CCGGTCTGAG TTTTAGCGGT CTCTGCGCCT ATGGTCATCC CGGCTATACC
GACGCGTTCC TGGTTCCCTA CCGAGGCTAT GGCCAGATCG CCTACCTCGA TTGGGGTGGA
ACGTCTAACT ACAACTCGCT CCAAGTCTCA TTCCAGAAAC GCTACGGCAA AGGACTCACC
TTCGGCGCCG TCTATACCTA CTCAAAGAGC CTTGGCACTG CTAACTCCGA CCAGGATACG
CAAGACGCCT TTAATGCCTT GGTCGATTAC CGTGCTTTGA GCTGGGACCG TACCCATGTG
TTCGCCGCGA ACTATGTGTA CGACATCCCG GGCCTTGCCA AGCATTTCAA CGCACCCAAA
TGGGTCGGCT ATATCACCGA CAACTACCAG TTGAGCGGAG TTACCAACTT CCAGACCGGT
ACCCCTGTTG ATATGGGAAA CAACTGGTCT TGGGAGCACG GTGCTCTGAC TGGCGGCAAC
ATGTGGGGTG CAACCCAGTA CTACTACACC CTCGACAGCT CCGGGAATCC GGTGCTGCCC
GGCATCGGTC CGCCACCGCG TGGCTCACGC GACCAGATCC GCTACGGCGG CTTGCAGAAC
TGGGATATGT CGCTCTTCAA GAACATCCCG TTCCATGAGC GCTACAACAT TCAACTTCGT
CTCGAAGCCT TCAACGTGTT CAACCACACG AACTTCAGCG CCGCGCACTG GACGATCAAC
ACCAATGGTC CGTGGGAGTA TTCACCCAAC GACGCGTTGT CCATAACCCA GGGTTCTGAT
TGGGGAACAC CCCAGAGCAC ATATGGCACT GGCCCCAGCG GCTTCCGTGT AGTCCAACTC
GGCGCCCGCT TTAGCTTCTA A
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| Protein sequence | MLRLRASRSP LGRRRGPWAK ASSLILLITV LTFLSTLSFA QVTSGTMFGD VTDPSGAVIP
GAKVTAHADS IGVTRTVTAS GTGEFVIPNL PPATYTVTVE SKGFKALKKE GVILNAADKL
NAGQFALPVG TTDSQVTVTA DAAQLQLQSN SGERSDIITS KQLNEVALNG RNVLDYMKLV
PGVSGMYDGH ASGTGGNDAF NINGTRANQH EYTIDGASNV DTGNNGGTHI TINPDAIEEV
KVLTSNYQAE YGKAAGGQIA LTTKSGTNDW HGNGRFYHRH EGLNANEYFN KQAELAAGSD
NEPAKYRYNY VGYSIGGPVL KNKLFFFWNQ EYYRQYVPLG NTIQAYVPTA LERQGDFSQS
VRPGTDASGN AISVPVEISG PGIVGNKINR DALTPAQQST FDNMQKILNL YPMPNVPGFA
VNGQQYNYST LPSAPDPRRE DILRIDWQIN NANRIYGRWA HNADTMTAPY TPFPGPFGIF
ACSAPEFNGG CTQKHPGWNF SVNLVSTITP TVLNEFSIGP SHTLSLAESN GGISSSALGV
NLPVLYPGLT DTIPDVAFNG MNNVAFSNPY LGATPWKQAN TTINVNDNLT WSYKNHTFKT
GVFYQRNRKD QIAWGNINGQ FGFDSGQTAP SGCDSNSLQC GDPIASALLG QFQSFSQSTA
RPVGKFRYDQ WELYVQDTWK LTPTFTLDYG MRFAYIPPQY DANMQIALFD PNAYNPANAV
ELDGGGNIMP GTGDVYNGMR FTKMGDLPAG GWGSRGFMPE PRIGFAWDPF SNHKTVLRGG
FGMMHDRVQG NLIFNPVFNN PVTVRTASLG SGSIEQFGGA PGFGNGVLGG VIGADLSGKV
PTVYSFSLGV QREIGWGSTI DVAYVGSLSR HLVTSHDINA VPYGAAFERQ NQDPNCDLSY
EGGPNFGGTV PNVEPNLNPI YTAAGLSFSG LCAYGHPGYT DAFLVPYRGY GQIAYLDWGG
TSNYNSLQVS FQKRYGKGLT FGAVYTYSKS LGTANSDQDT QDAFNALVDY RALSWDRTHV
FAANYVYDIP GLAKHFNAPK WVGYITDNYQ LSGVTNFQTG TPVDMGNNWS WEHGALTGGN
MWGATQYYYT LDSSGNPVLP GIGPPPRGSR DQIRYGGLQN WDMSLFKNIP FHERYNIQLR
LEAFNVFNHT NFSAAHWTIN TNGPWEYSPN DALSITQGSD WGTPQSTYGT GPSGFRVVQL
GARFSF
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