Gene Acid345_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4151 
Symbol 
ID4072342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4910974 
End bp4911876 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID637986182 
Productbeta-lactamase 
Protein accessionYP_593225 
Protein GI94971177 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.433565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCT CTCTTCTCGC AACGCTCATT CTCTCCACTC TTGCTCTCGC GCAATCCCCA 
CAACTTCACA CCCGCGACCT CCTCTGGCAG AAAATGACTG CCGACGTCAC CGCCGTCCAA
CAGCACTTCG ACGGCGTCAT GGGCATCACC ATCCGCGACC TCACCGACAA CCGCGAATTC
ACCCTCAACC CCGACGACAT CTTTCCCACC GCCTCGTCCA TCAAGCTCCC GCTGCTCGTC
GAACTCTGGC GTCAATCGCA AACCGGCACC GGCCAAAAGC TCACCGACCT CTACACTTTT
CGCAAAGAAG ACGTCGTTCC CGACAGCGCC ATCATGGAGA ACCTCACCCC CGGCGTCTCG
AAGGTCACCA ACCGCGATCT CGCCGGCATG GTCGTCGCCG TCTCCGACAA CTCTGCCACC
AACGTCCTCA TCGACCGCGT CGGCTTCGAC AACGTGAACA AGATGCTCGA CGCCCAAGGC
CTGCATAAAA CGCGCCTCCG CCGCCATATG ATGGACCTCG CCGCCGCCAA GGCCGGCAAC
GAAAATGTCT CCACCCCGCA CGAGATGACG CAGCTCCTCG AAGCCGTCTA TCGCGGCAAG
ATACTCAACC CCCAGATGTC CGAAGATTTC TGGAACCTGA TGTGCACAAA AAAAGAGAGC
CCGCTCCCGC GGCTGCTCCC TGAAGATCTC CGCATTGCCA ATAAGCCCGG CGAACTCGAC
GGCGTCCGCA CCGACTCCGG CCTGGTGTTC CTGAAAAACC GTCCGTACGT AATCAGCGTC
ATGACCACCT ACGCCGCCAA CGAACGCGAA GCCTCCGCTG CCATCGCGCA AATCTCGCTA
ATCGCCTACA ACTACTTCCA CGCCGTCTCC ATCAGCAGCG ACTACGGCCG CAAAATGGAA
TGA
 
Protein sequence
MFRSLLATLI LSTLALAQSP QLHTRDLLWQ KMTADVTAVQ QHFDGVMGIT IRDLTDNREF 
TLNPDDIFPT ASSIKLPLLV ELWRQSQTGT GQKLTDLYTF RKEDVVPDSA IMENLTPGVS
KVTNRDLAGM VVAVSDNSAT NVLIDRVGFD NVNKMLDAQG LHKTRLRRHM MDLAAAKAGN
ENVSTPHEMT QLLEAVYRGK ILNPQMSEDF WNLMCTKKES PLPRLLPEDL RIANKPGELD
GVRTDSGLVF LKNRPYVISV MTTYAANERE ASAAIAQISL IAYNYFHAVS ISSDYGRKME