| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4145 |
|---|
| Symbol | |
|---|
| ID | 4072336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4904766 |
|---|
| End bp | 4905845 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637986176 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_593219 |
|---|
| Protein GI | 94971171 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.170597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCA CCATCGCTGT TGACGCCATG GGCTCCGACA AGGCCCCCAC GCCTGAGATC
GAGGGCGCGC TCCAGGCTAT TCGCCATTTT GATGTCCGCG TAATCCTCGT CGGCAAGCAG
GACGTGCTGC GCGAGCACCT CGGCGCGCAT GCCCATCCCG GTCGCCTGCC CATCGAGATC
GTGCACGCCA GCGAAGTCAT CAGCATGCAC GACAAGGCCG CGCTGGCCGT GCGCAGCAAG
CGCGATTCGT CCATGCGCGT GGGTTTGCGG CTCGTCCGCG AAGGTAAGGC CGATGCGTTC
GTAACCGCCG GCAACACCGG CGCCGCGATG GCGACAGCGA AGATGGTTCT CGGTGCGCTG
CCCGGTGTAG ACCGTCCTGC CCTCGCAGCA GTCTTCCCGA CCGAAAAGCG CACCGCGGCA
ATCCTGCTCG ACGTAGGCGC CAACGTAGAT TGCAAGCCGC AAAACCTGCA GCAGTTCGCC
ATCATGGGCG AGGTTTATTT CCGCACCGTG TTCGCCGGCA AGTCTCCGCA TGCGCGCAGT
CCGCGCGTCG GAATTCTTTC CATCGGCGAA GAAGAGACCA AGGGCAATGA ACTGACCCGC
GAAGCTTACA AGCTGGTAAA GACGCTGCCG CTCAACTTCG TCGGCAACGT CGAGGGCCGC
GATCTCTTCA ACGGCAATGT CGATGTCCTC GTCTGCGACG GCTTCGTCGG CAATGTCGCC
CTGAAGATTT CCGAGGGCCT GGTCAAGACC GTCCGCGAGA TGCTGAAGGA ATCGCTGCAG
CAGACGATTG CCCGCCAAGT CGGCTTCCTG CTCTCGCGCC AGGCGTTCGT CGACTTCAAA
AAACGCCTCG ACTACAGCGA GTACGGCGGC GCCCCGCTCC TCGGCCTGAA AGGCGCAGCC
TTCGTGGGCC ACGGCTCGTC CAACGCCAAC GCAATCAAGA ACGCGATCCG CGTCGCCGCA
GAATACGTCG AGCACCGCGT GAACGAAGCC ATCGCGCGCG AGATCGCAGC AGCCAGCGAG
AAATTGGGAA ACCATCACTC CTCAGCGAAA AAAGAAGAGG GCGAGGAAGC GCGGGCGTAG
|
|---|
| Protein sequence | MPITIAVDAM GSDKAPTPEI EGALQAIRHF DVRVILVGKQ DVLREHLGAH AHPGRLPIEI
VHASEVISMH DKAALAVRSK RDSSMRVGLR LVREGKADAF VTAGNTGAAM ATAKMVLGAL
PGVDRPALAA VFPTEKRTAA ILLDVGANVD CKPQNLQQFA IMGEVYFRTV FAGKSPHARS
PRVGILSIGE EETKGNELTR EAYKLVKTLP LNFVGNVEGR DLFNGNVDVL VCDGFVGNVA
LKISEGLVKT VREMLKESLQ QTIARQVGFL LSRQAFVDFK KRLDYSEYGG APLLGLKGAA
FVGHGSSNAN AIKNAIRVAA EYVEHRVNEA IAREIAAASE KLGNHHSSAK KEEGEEARA
|
|---|
| |