Gene Acid345_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4112 
Symbol 
ID4072303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4868544 
End bp4869107 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID637986143 
ProductAMMECR1 
Protein accessionYP_593186 
Protein GI94971138 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.558483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.706309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC TACCCAGCAG TAGTGCGGTT GGCGAATATT CCCAGACAGA ACGAGAAACC 
CTGATCCGGT TGGCGCATGC TGCAATCGAT AGCGCGTTGC ATGACCGGCC GATGGACCTG
ACGGCGCCGA CTCCGCATCT CGAGGAGCAA CGCGGTGCTT TTACGACCCT GCATCTGCAC
GGTAAGTTGC GCGGGTGCAT TGGCTATGTG CTTCCGGTGG CGTCGCTCTA CAAGACTGTG
GCAAACACCG CTGTGGGCGC CGCGTTTGAA GATCCACGGT TTGAGCGGGT GAAAGCTCCT
GAGGCGCCAG AACTCAAAGT GGAGATCAGC GTGATGTCCC TGCTGTTCCC GATCGAACCG
AAGGATGTAG AAGTGGGCAA GCATGGACTG CTGATTTCCT GGAATATGCG GCGCGGCTTA
CTGCTGCCGC AAGTTGCAAC GGAGCGCAAC TGGGACGCCC AGACGTTCCT GAGCGAGACC
TGTCGTAAGG CGATGCTGCC TGTGGATGCA TGGCAGCGTG GTGCTTCCAT CGAGGCGTTC
ACGGCTGAAA TCTTTGGAGA GTAG
 
Protein sequence
MSQLPSSSAV GEYSQTERET LIRLAHAAID SALHDRPMDL TAPTPHLEEQ RGAFTTLHLH 
GKLRGCIGYV LPVASLYKTV ANTAVGAAFE DPRFERVKAP EAPELKVEIS VMSLLFPIEP
KDVEVGKHGL LISWNMRRGL LLPQVATERN WDAQTFLSET CRKAMLPVDA WQRGASIEAF
TAEIFGE