| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4100 |
|---|
| Symbol | |
|---|
| ID | 4072291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4859937 |
|---|
| End bp | 4860473 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986131 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_593174 |
|---|
| Protein GI | 94971126 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGCG TAGGCCAAAA ATTTCCCGCA TTCAACCTGA AAGCCACAGT GAGCCTCGAA
AAAGGCAAGG AATTCGCAGA CATCAAGGAC AACGATTACG CGGGCAAGTG GAAGATTTAT
TTCTTCTGGC CCAAGGACTT CACCTTCGTT TGCCCGACGG AAATCGCTGC GTTCGGCAAG
ATGAACAAGG AATTCGCGGA GCGCGATACC CAGGTCCTTG GCGGCAGCAC CGATAGCGAA
TTCGTCCACC ACGCGTGGCG CACCCATCAC GACGATCTTC GCAACCTGCC CTTCCCCATG
CTCGCCGATG TGAAGCGTGA GCTCACCAGC GACCTCGGCA TCCTCGATCC CGAAGCCGGC
GTTGCGCAGC GTGCGACCTA CATCGTTGAC CCGCAGGGAA TCATCCGCTT CGCGTATGTC
ACCGACCTCT CGGTTGGCCG CAGCCCGAGC GAAGTGCTTC GCGTGCTCGA CGCTCTTCAG
ACCGACGAGC TCTGCCCGTG CAACTGGCAG AAGGGCCAGG AGACTTTGCA CGTCTAA
|
|---|
| Protein sequence | MLGVGQKFPA FNLKATVSLE KGKEFADIKD NDYAGKWKIY FFWPKDFTFV CPTEIAAFGK
MNKEFAERDT QVLGGSTDSE FVHHAWRTHH DDLRNLPFPM LADVKRELTS DLGILDPEAG
VAQRATYIVD PQGIIRFAYV TDLSVGRSPS EVLRVLDALQ TDELCPCNWQ KGQETLHV
|
|---|
| |