| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4071 |
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| Symbol | |
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| ID | 4072493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4817967 |
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| End bp | 4821134 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986102 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_593145 |
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| Protein GI | 94971097 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.702974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.202748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATT TCTTCATTAG AAGGCCGATT GTGGCCATGG TGATCGCCAT TCTTATGGTG
ATCATCGGCG TGGTCTCCAT GCTCCGCCTG CCCACCGCCC AATTCCCCGA CATCGCGCCG
CCGGAAGTTC AAGTGAAAGC TACCTATCCG GGCGCCGATG CAGAAACCGT TGAACAGGCA
GTCGCAACCC CGATCGAGCA GCAGATGAGC GGCGTGGACA ACATGAACTA CATGTTCTCC
ACTAACGCAA ACAATGGCGC GACGACCTTG ACCGTCAACT TCGACATCAA GACCGATCCC
AGCACCGACC AGATTCTGTC GCAGATGCGC ACCAACCAGG CCAACTCTCA GTTACCTGCG
GACGTCGTGA ACTTCGGTGT CACCGTGCAA AAGTCCACGA TGGCGCCTTT GATGCTCATC
ACGCTGTATT CGCCCAAGGG CACCTACGAC AACATCTTCC TGGCGAACTA CTCCTACATC
AACTTGAACG ATCAGTTGAC CCGCGTGCCC GGTATCGCGA GCGTTACCGT ATTCGGCGCC
GGCCAGTACG CGATGCGCGT GTGGGTGAAG CCAGACACGT TGGCGAAGTT AAGCGTGACT
GTGCCGGAGA TCATCAAGGT CATCCAGGCG CAGAACACCG TGAACCCAGC CGGCCAGATC
GGCGGCGAGC CGGTGCCGCA AGGACAAGAC TTCACCTACA ACGTCCGTGC GAAAGGCCGC
CTTCCTTCGG CGGAAGAATT CGAACAAATT GTCGTTCGTG CCAATCCTGA TGGTTCGATC
CTTCGTCTGA AAGATGTCGC TCGAATCGAA CTCGGCGCAC AGAACTACAA CATCATCGGA
CGCTACAGCG GCAAGCCCGC GGCTGTGGTC GCTGTCTATC AGCTACCCGG ATCGAACGCA
GTAAAAGCCG CAGCCGGCGT GCGGGCCTTG ATGGAAGAAG CCAAGACTCG CTTCCCGCAG
GACCTGGATT ACGACATCGC GCTCGACACG ACCGTTGCGG TCACCGAAGG CCTCAAGGAG
ATTCAGCACA CCCTCGCTGA AGCCATCGTC CTCGTGATCC TCGTTGTGTA CATCTTCCTG
CAAGGCTGGC GCACCACGCT GATCCCCCTG CTCGCCGTGC CGGTTTCTCT CGTCGGCACT
TTCGTCGTCT TCCCCTTGCT GGGATTTTCC ATCAACACTC TCTCCCTCTT CGGACTGGTG
CTGGCCATCG GCATCGTCGT GGACGATGCC ATCGTCGTAG TGGAAGCCGT CGAGCACCAC
ATCGAACATG GCCTCTCTCC AAAAGATGCC GCCTACAAGG CGATGGAGGA AGTCTCCGGC
CCGGTCGTCG CCATCGCGCT GATTCTGGCC GCCGTCTTCG TGCCCACCGC CTTCATCCCC
GGCATCACCG GCCGCCTCTA CCAGCAGTTC GCAATCACTA TCGCGATTTC CGTGATCTTC
TCCGCGTTCA ACGCTCTCTC GCTCAGCCCA GCGCTGGCCG CCCTTTTGCT GAAACCGAAG
AAAGAAGCAC GCGGACCGCT CGGTGCGTTC TTCCGCTGGT TCAACAAGTG GTTTGGCAGA
GCCACAGACG GTTACGTCAG CATTTGCGGG GGGATGATTC GCAAAGCCGC ACTTAGCATG
ATCCTCCTCG CGGGTCTTAC CGTGCTCGCC GGCTGGTTCG GCAAGAACCT GCCGAAGAGC
TTCCTGCCCG ACGAAGACCA GGGCTACGTG TTCGCGGGGT TGCAGCTGCC AAACGCTGCT
TCTCTCCAGC GCAACAGCGA CGCCGCCAAG AAGATCGAGG AAATGATCCT CAAGACTCCT
GGCGTGCACT CCGTGACGAC CGTCGCCGGA TACAGCATGT TGAGCGGCGT GCAGGCCACG
TACAGCACCT TCTTCTGGAT CACTCTCAAA GAGTGGAGCG AACGCAAAAC TCCGGAAGAG
TCGTATGAGG GAATCAAGAA GCACCTCAAC AAGGAGTTGG CGTCGGTAAC GGAAGGTGTT
GCGTTCTCGT TCCCGCCGCC TGCGATTCCC GGTGTAGGAG CTTCCGGCGG ATTCACCTTC
TTGCTCGAAG ACCGCGCCGG CAAAGATGTC GCATTCCTCA GCCAGAACCT GCAAAAGTTC
ATGGCCGCTG CCAGGAAACG TCCTGAGATC GCCGGAATCT CCACAACGGC GTTGCTCTCG
GTGCCCCAGG TTTATGTTGA CGTCGATCGC CCGAGGGTGA TCGCACAAGG CGTTCAACTC
AATGACGTTT ACCGCACCAT GCAGACCTTT ATGGGCGGCA CACTCGTCAA TTACTTCAAC
CGATTCGGCC GCCAGTGGCA GGTCTACGTG CAAGCCGAAG GCGATTACCG TACTAAGGCC
GAAAACGTTG GCCAGTTCTA CGTGAACAAC AACGATGGCC AATCCGTACC GCTGAGTGCC
GTCACTAGTA TCAAGCGAAC CTCCGGTCCC GAGTTCACTA TGCGCTACAA CTTGTACCGG
TGCGTTCAGA TCAATGGAAA TGCGGCGCCC GGCTACAGTT CGGAACAGGC AATTCAGGCA
CTTGAAGAGA CCTTCAAGGA AAGCATGCCC AGCGAGATGG GCTTCGACTA CATGGGTATG
TCGTACCAGG AAAAGAAAGC TGCGGAAGGC GTACCGGCTT CTGCAATCTT CGGCATGTCG
CTGCTGTTCG TGTTCCTCAT CCTCGCCGCG CAATATGAAA GCTGGTCTCT GCCTTTCAGC
GTACTGCTGG GCACGCCGAT CGCCGTGGCC GGCGCATTCG CGTTCCTCTA TTTCCGCGGA
ATGGAAAACA ACATCTACGT GCAGATCGGC CTCGTCATGC TCATCGGACT TGCTGCGAAG
AACGCGATTC TTATCGTGGA ATTCGCGAAA ATGGAATACG ACAAGGGCAA GTCTGCGGAG
GAAGCAGCAC TTATCGCAGC TAAGCTCCGT CTGCGACCGA TTCTCATGAC GGCGTTCGCC
TTCATTCTCG GTTGCGTTCC TCTGTGGGCG GCTTCCGGCG CCGGCGCCAT TTCCCGTCGC
GTCCTCGGAA CCGCGGTGAT TGGAGGAATG ATGGCAGCGT CCCTGCTCGC GATCTTCCTC
ATTCCGGTCA GCTTCGACGT CGTCGAACGT TTGTCGCACA TGGGAGGCAG TAAACATCCG
CCATCGAATG AAGGCGCAGA GACCACCGTC GCAGGCGGAG GGCACTGA
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| Protein sequence | MANFFIRRPI VAMVIAILMV IIGVVSMLRL PTAQFPDIAP PEVQVKATYP GADAETVEQA
VATPIEQQMS GVDNMNYMFS TNANNGATTL TVNFDIKTDP STDQILSQMR TNQANSQLPA
DVVNFGVTVQ KSTMAPLMLI TLYSPKGTYD NIFLANYSYI NLNDQLTRVP GIASVTVFGA
GQYAMRVWVK PDTLAKLSVT VPEIIKVIQA QNTVNPAGQI GGEPVPQGQD FTYNVRAKGR
LPSAEEFEQI VVRANPDGSI LRLKDVARIE LGAQNYNIIG RYSGKPAAVV AVYQLPGSNA
VKAAAGVRAL MEEAKTRFPQ DLDYDIALDT TVAVTEGLKE IQHTLAEAIV LVILVVYIFL
QGWRTTLIPL LAVPVSLVGT FVVFPLLGFS INTLSLFGLV LAIGIVVDDA IVVVEAVEHH
IEHGLSPKDA AYKAMEEVSG PVVAIALILA AVFVPTAFIP GITGRLYQQF AITIAISVIF
SAFNALSLSP ALAALLLKPK KEARGPLGAF FRWFNKWFGR ATDGYVSICG GMIRKAALSM
ILLAGLTVLA GWFGKNLPKS FLPDEDQGYV FAGLQLPNAA SLQRNSDAAK KIEEMILKTP
GVHSVTTVAG YSMLSGVQAT YSTFFWITLK EWSERKTPEE SYEGIKKHLN KELASVTEGV
AFSFPPPAIP GVGASGGFTF LLEDRAGKDV AFLSQNLQKF MAAARKRPEI AGISTTALLS
VPQVYVDVDR PRVIAQGVQL NDVYRTMQTF MGGTLVNYFN RFGRQWQVYV QAEGDYRTKA
ENVGQFYVNN NDGQSVPLSA VTSIKRTSGP EFTMRYNLYR CVQINGNAAP GYSSEQAIQA
LEETFKESMP SEMGFDYMGM SYQEKKAAEG VPASAIFGMS LLFVFLILAA QYESWSLPFS
VLLGTPIAVA GAFAFLYFRG MENNIYVQIG LVMLIGLAAK NAILIVEFAK MEYDKGKSAE
EAALIAAKLR LRPILMTAFA FILGCVPLWA ASGAGAISRR VLGTAVIGGM MAASLLAIFL
IPVSFDVVER LSHMGGSKHP PSNEGAETTV AGGGH
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