Gene Acid345_4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4063 
Symbol 
ID4072485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4808229 
End bp4808978 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID637986094 
Producthistidine kinase 
Protein accessionYP_593137 
Protein GI94971089 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.460066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0775473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACC TGCCAAAATC TCGAGCGCCC AATCTAAAAA AAGCACTCCG CGATCCGCGC 
CACGCCGAAA AGGTTCCTGA TGTGACGGAG TTAATGAAGG CGCAGGAGGA ACTGAAGAGC
CTCAGCCAAA AGTTGATTAC GGCACACGAA GAAGAGCGTA GCTATCTCGC CCGCGAGTTG
CACGACGACA CGAGTCAAAG ACTGGCTCTG CTGGCAATCC AACTAGAAGC GCTAGCCATG
AACCTGCCTC AAAAAAAGGC AACTCTCAGA GCGGCGTTAA TGGACATGCA CAAGAGTGTC
ACCGATCTTG CTGCGGACAT TCACGCGCTC TCGCGCCAAC TGCATCCGTC CGTTCTCGAT
CGCCTGGGAG CTGTAGCTGC GATACGCGGC CTCTGTGACC AGGTTCGTGC GCAGCGTGGT
ATCTCGGTAA CGTTTTCCGG CGCGGATATT TCGGACGCTC TTCCGAGAGA ATCGGCTTTG
TGCCTGTACC GGATCGCGGA AGAAGCCATT ACCAACGCGA TAAAACATGG AAGCGCAACG
GAACTCGTGG TTGAACTGTC TCAGAGATCG AACGCAGTCG TTCTTACGAT TCGCGACAAC
GGCAGTGGTT TCGATCTTAG AGCGCAGTCC GAAGGACTCG GGTTTCTGAG TATGCGCGAG
CGCTTGCGAC TGGCATCGGG ATCGCTTTTG GTTCGATCGG CGTCGGGCGA AGGCACCGCT
ATCGAAGCTT CTATTCCGTT GTCCCGTTGA
 
Protein sequence
MSHLPKSRAP NLKKALRDPR HAEKVPDVTE LMKAQEELKS LSQKLITAHE EERSYLAREL 
HDDTSQRLAL LAIQLEALAM NLPQKKATLR AALMDMHKSV TDLAADIHAL SRQLHPSVLD
RLGAVAAIRG LCDQVRAQRG ISVTFSGADI SDALPRESAL CLYRIAEEAI TNAIKHGSAT
ELVVELSQRS NAVVLTIRDN GSGFDLRAQS EGLGFLSMRE RLRLASGSLL VRSASGEGTA
IEASIPLSR