Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4063 |
Symbol | |
ID | 4072485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4808229 |
End bp | 4808978 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637986094 |
Product | histidine kinase |
Protein accession | YP_593137 |
Protein GI | 94971089 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.460066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0775473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACC TGCCAAAATC TCGAGCGCCC AATCTAAAAA AAGCACTCCG CGATCCGCGC CACGCCGAAA AGGTTCCTGA TGTGACGGAG TTAATGAAGG CGCAGGAGGA ACTGAAGAGC CTCAGCCAAA AGTTGATTAC GGCACACGAA GAAGAGCGTA GCTATCTCGC CCGCGAGTTG CACGACGACA CGAGTCAAAG ACTGGCTCTG CTGGCAATCC AACTAGAAGC GCTAGCCATG AACCTGCCTC AAAAAAAGGC AACTCTCAGA GCGGCGTTAA TGGACATGCA CAAGAGTGTC ACCGATCTTG CTGCGGACAT TCACGCGCTC TCGCGCCAAC TGCATCCGTC CGTTCTCGAT CGCCTGGGAG CTGTAGCTGC GATACGCGGC CTCTGTGACC AGGTTCGTGC GCAGCGTGGT ATCTCGGTAA CGTTTTCCGG CGCGGATATT TCGGACGCTC TTCCGAGAGA ATCGGCTTTG TGCCTGTACC GGATCGCGGA AGAAGCCATT ACCAACGCGA TAAAACATGG AAGCGCAACG GAACTCGTGG TTGAACTGTC TCAGAGATCG AACGCAGTCG TTCTTACGAT TCGCGACAAC GGCAGTGGTT TCGATCTTAG AGCGCAGTCC GAAGGACTCG GGTTTCTGAG TATGCGCGAG CGCTTGCGAC TGGCATCGGG ATCGCTTTTG GTTCGATCGG CGTCGGGCGA AGGCACCGCT ATCGAAGCTT CTATTCCGTT GTCCCGTTGA
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Protein sequence | MSHLPKSRAP NLKKALRDPR HAEKVPDVTE LMKAQEELKS LSQKLITAHE EERSYLAREL HDDTSQRLAL LAIQLEALAM NLPQKKATLR AALMDMHKSV TDLAADIHAL SRQLHPSVLD RLGAVAAIRG LCDQVRAQRG ISVTFSGADI SDALPRESAL CLYRIAEEAI TNAIKHGSAT ELVVELSQRS NAVVLTIRDN GSGFDLRAQS EGLGFLSMRE RLRLASGSLL VRSASGEGTA IEASIPLSR
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