| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4055 |
|---|
| Symbol | |
|---|
| ID | 4072477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4795109 |
|---|
| End bp | 4796869 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637986086 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_593129 |
|---|
| Protein GI | 94971081 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.424185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.174789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGG TTCGGCTGCG GACCAAGTTC CTGATCGCCA TGCTGCTCAC ATCCGCGGGC
CTCACCATTG GCACTCTGCT GGTGGTGCAA CACACGGTTG CGGTGCGAGC ACGGGAAGGC
ATCGTCGCCG ACCTCCAGAA CTCCGTAGAG AACTTTCGCG CGGAACAACT AGAGCGCGAG
AAGAACCTGC GCGCTTCCGC GCGACTCCTC GCCGATCTCC CGATCGTGAA AGCCCTGATG
ACGTCGCGCC ACGCGCCCAC CATTCAGGAT GCTTCCGAGG AACTTTTTAA GCTTTCCGAG
CGAGACCTTT TCGCCCTGGT TGATCCAACT GGCCAGGTTG TCGGCTTCCA CACCAACCCT
GCCGGAGTGC CGTCGGCGCC GATCCAGCAC GTGCTCTCGC AACGCGCACC CACTGCAAAT
TCGTTCGAAT GGTGGTACAC CGGCGGACAC TTATACGAGG TGTATCTCGA GCCGATCTAT
TTCGGTCCGA GCAGCAACGA CACGCTGCTG GGTGTCATCG CAGTTGGATA CGAAATCAAT
GGTCCACTGG CGCGCCAGGT CGGAAGGCTG GCTGACAGTG AAGTCGCCGT GCTTTATCGC
GGAAATGTCG TCGCAAGCAC GCTGAACGAC CGGCCGTCGC TCGAGTTCCT GCAGCATACG
GGATCGAGCA ATTCCTCGCC TGCAGATGTC CTGCTGGGAC AGAAGAAGTT CGTCGCTACT
TCTATCCTCC TCAGCGCTGA CGATTCCACG CCAGTGACGA TGGTCGTGAT GAAGTCCTAT
GACAACGCCA TCTCCTTCCT GCAGCGTTTG CAGCGATTGC TTCTTGTAAT TGGGATTGCC
GCGGTACTTG CGGGCAGCAT CCTTGTTTAC TTCATCGCGC GAACCTTCAC CCGTCCGCTC
GAAACCCTTG CAGTAGGCGT GAGCGCTCTC GGCACCGGCG ACTTCGCGTT CCCTCTGCCG
GGAGGTGGTG GCGGAGAAGT GGTGAAGTTG ACGCAGGCCT TCGTGGATAT GCGTGACCGC
CTTCGCGCGA CGCAACAGAG CTTGATTGAG AGCGAGCGAC TGGCGACGAT CGGACGCATG
GCTGGTTCGA TCTCGCACGA CCTGCGCCAT CCGCTGACTG CCGTGCTCGC GAATGCGGAA
TTCCTCGCCG AAGCTAATCT CAACACGACA CAACGCGAAG AGCTGTACAT GGAAATCAGG
GTGGCGGTGA ATCGCCTGAC GGATCTTGTT GACTCTCTGC TTGAACTGTC GCGTCCGGCG
CAAGCGCTAA CGCTCACTGA GGGACCGATC GAAGGCAGCA TTTTGCGCTC GATCGAACTC
ATTCGGGCTC ATCCCGAGTT CCATAAGGTG AGTATCGAAG TCGAGGGCGC AGCGGGAGTG
GACACGCGGG TGGACGGGAG AAAGATGGAG CGCGTCTTCT ACAACCTCCT GTTGAACGCA
TGCCAAGCGG TGCAGAGTCG CGCGGGCAAG GTCGTCATCA GCGTCACGGA GAGCTCCGCG
GGAGTTGAAA TCCGGGTTCG TGACAATGGA CCGGGAGTGG AACCGTCGAT CGCGACAAAG
TTGTTTCAGC CATTCGTGAG CGTCGGCAAA GAAAACGGTA CCGGACTCGG GCTGACGATC
GCGCAGAAGA TCGTGCAGGA CCACGGCGGC TCGCTCGAAG TGGAGTGGTC GTCGCCGGGC
AACACCGTGA TGCGGATCGT CCTGCCGCAA CCAACGCGAT CAGACCGATG GCGCGCGCCC
CTCGCTAAGA GTTCTTTGTA A
|
|---|
| Protein sequence | MGGVRLRTKF LIAMLLTSAG LTIGTLLVVQ HTVAVRAREG IVADLQNSVE NFRAEQLERE
KNLRASARLL ADLPIVKALM TSRHAPTIQD ASEELFKLSE RDLFALVDPT GQVVGFHTNP
AGVPSAPIQH VLSQRAPTAN SFEWWYTGGH LYEVYLEPIY FGPSSNDTLL GVIAVGYEIN
GPLARQVGRL ADSEVAVLYR GNVVASTLND RPSLEFLQHT GSSNSSPADV LLGQKKFVAT
SILLSADDST PVTMVVMKSY DNAISFLQRL QRLLLVIGIA AVLAGSILVY FIARTFTRPL
ETLAVGVSAL GTGDFAFPLP GGGGGEVVKL TQAFVDMRDR LRATQQSLIE SERLATIGRM
AGSISHDLRH PLTAVLANAE FLAEANLNTT QREELYMEIR VAVNRLTDLV DSLLELSRPA
QALTLTEGPI EGSILRSIEL IRAHPEFHKV SIEVEGAAGV DTRVDGRKME RVFYNLLLNA
CQAVQSRAGK VVISVTESSA GVEIRVRDNG PGVEPSIATK LFQPFVSVGK ENGTGLGLTI
AQKIVQDHGG SLEVEWSSPG NTVMRIVLPQ PTRSDRWRAP LAKSSL
|
|---|
| |