Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4036 |
Symbol | |
ID | 4071175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4771157 |
End bp | 4772011 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986066 |
Product | Cof protein |
Protein accession | YP_593110 |
Protein GI | 94971062 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCCGCA TCCGCCTCAT CTCCATCGAC ATAGATGGCA CCCTGCTGAA CTCGCAAAAC GAGCTTTCGG CCGCGAACCT CTCTGCCCTG CACCGCGCTC ACGACGAAGG CATCCAAATC GTCCTCGGCA CCGGACGCCG CCACGCCTTC GCCCTGCCCA TCGCCGAAGC CCTCGGCTTC GACCTCTGGA TGATCAGCTC CAACGGTGCC GTAACCCGCT CTACCCGCGA CGAGCACTTC TTCATGGACC TGCTCCCCGC GAAGGTGGCT CGCGACCTCT GCATCTACAT GGGCGACGAA TTCCGGGCCA ACACCGTCAT CACCTTCGAG CGCCCGGGCA AAGGCGCGCT CATTGTCGAG CGCACCGACG AGCTCACCGA ATCCATCCAG CGCTGGATCG AAAAAAACTC ACAATTCATT GAGTTCATCG TCCCAATAGA GACAGGAATT GTGACCGACC CGATCCAAGC CATGTTTTGC GGCACCATTG CCAAGATGGA ACTCGCGCAG GCGAAGCTTC TCGCGTGGCC CGGCCGCGAC CAGGTCACGG TGCTCAAAAC CCAGTACGAC CACCGCAACC TCTGCATCGT CGACATCCTC AACCGCGATT GCTCCAAGGG CCATGCTTTG CAACGCTTTG CCGACTCTCG CGGTATTTCC CGGGACGAAA TCGTCGCCAT CGGCGACAAC TTTAACGACA TTGAAATGTT GCAAGTTGCC GGACATCCGT TCATCATGGG CAACGCCTCG AATGAACTGA AGCAGAACGG CTGGCCCGTC ACTCTCACCA ACGATGAGAG CGGTGTCGCC GCCGTAATCG ACCAGGTACT CGCGGAAGCA ACGACGAATG CGTAA
|
Protein sequence | MSRIRLISID IDGTLLNSQN ELSAANLSAL HRAHDEGIQI VLGTGRRHAF ALPIAEALGF DLWMISSNGA VTRSTRDEHF FMDLLPAKVA RDLCIYMGDE FRANTVITFE RPGKGALIVE RTDELTESIQ RWIEKNSQFI EFIVPIETGI VTDPIQAMFC GTIAKMELAQ AKLLAWPGRD QVTVLKTQYD HRNLCIVDIL NRDCSKGHAL QRFADSRGIS RDEIVAIGDN FNDIEMLQVA GHPFIMGNAS NELKQNGWPV TLTNDESGVA AVIDQVLAEA TTNA
|
| |