Gene Acid345_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3997 
Symbol 
ID4071133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4726088 
End bp4726429 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID637986024 
Productanti-sigma-factor antagonist 
Protein accessionYP_593071 
Protein GI94971023 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGT TACAGCTCGA CCCGCGATCG GGAGAGCAGA CCGCCATCTT GCACTGCCAG 
GGCCGGATCG TCTTCCATGA GGAAGCTAAA ACGTTGGCCG AGGCGGTGCG GGCGCTGATC
GAAAAGCACA AGAAAGTGGT GCTCGATCTG ACTCATGTTC GCGATGTGGA CAGCGCCGGA
CTGGGTACTT TGGCCTCGCT CCACCTGTAT GCGCGCGAAC GCGGGCACGA ATTCGTGCTG
ATGAACCCGG TAACGTTTGT CCGGGATTTG CTCGAATTGA CCCAACTCGA CCGCGAACTC
AATGTTTTGA ATGGTAGCCG TGCTATGGAG TTCGCCGCTT AG
 
Protein sequence
MLQLQLDPRS GEQTAILHCQ GRIVFHEEAK TLAEAVRALI EKHKKVVLDL THVRDVDSAG 
LGTLASLHLY ARERGHEFVL MNPVTFVRDL LELTQLDREL NVLNGSRAME FAA