Gene Acid345_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3994 
Symbol 
ID4071130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4724034 
End bp4724990 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID637986021 
ProductDMT family permease 
Protein accessionYP_593068 
Protein GI94971020 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG TCCAGAGCCG GCATCGCCTG CAAGTGATCC TCGCCTTTGG GTTGGTGTAT 
GTGTTCTGGG GCTCCACGTA TCTAGCCATC GGCATCGCCG ACGACGAAAA AATCCCCGCC
GCCGCCATCT GTGCCATGCG CTTCCTGATA GCGGGCACGC TCATGCTCGG CGCCTGCGCC
CTGATGCGAA AGAAGATTCG CGTTTCCTGG GAGGAGTTTG GTCGTCTCGC GATGGTTGGC
TTCCTGCTGC TGGTGTGCGG CAATACAGGT TTGACGTGGG CAGAGAAGTA TGTAGCAACG
GGCTTCGCAT CGTTGATCGT CGCGATCACA CCGATCTGGA TCTTTTGTCT TGAGAGCTTC
GTCTACAAGG GAGACAAGAC TTCGGGGCGG GGAATCATCG GACTTGCGCT GGGCGTAGTG
GGCACGGGCG TGCTTTTCTG GCCGAAGCTC ATGAATCCCG AAATCCGCGG TGGCATGCAG
TTGCTTGGTG CCGTCAGCCT GCTCGGTTCA TCGTTCTGTT GGGCGAATGG TACGGTGCTT
TCGCGCCGCT GGAAATCGAA GTTCACCGTG GATCCGATTA CCGCGACGGC CTACGAGATG
ATTGTCGCGG GCACCGTGAA CCTGTGCATC AGCCTTGCAC TGCGCCAACA CAACATTCGA
TGGACCCACC GCGGCGTTGG CGCAATTCTC TATCTTGTCG TCTTCGGATC GTGGGTCGGA
TTCACTGCTT ACATCTGGCT GCTAAAGCAC GTGCCGACGC CCAAGGTCGC CACCTACGCG
TACGTGAACC CGATTGTCGC TGTCTTTCTC GGCTGGGCGG TGCTGCACGA GACCATCGAC
CGGTACATCG TCGCGGGTTC GGTCGTGATT GTGGCCGCGG TCGCGATGGT CACCATTGCG
AAGGTGAAAT CCGCACCCGC GGTTCAGATG GTCGAAGTGG AAACCACTGG CGATTAA
 
Protein sequence
MTEVQSRHRL QVILAFGLVY VFWGSTYLAI GIADDEKIPA AAICAMRFLI AGTLMLGACA 
LMRKKIRVSW EEFGRLAMVG FLLLVCGNTG LTWAEKYVAT GFASLIVAIT PIWIFCLESF
VYKGDKTSGR GIIGLALGVV GTGVLFWPKL MNPEIRGGMQ LLGAVSLLGS SFCWANGTVL
SRRWKSKFTV DPITATAYEM IVAGTVNLCI SLALRQHNIR WTHRGVGAIL YLVVFGSWVG
FTAYIWLLKH VPTPKVATYA YVNPIVAVFL GWAVLHETID RYIVAGSVVI VAAVAMVTIA
KVKSAPAVQM VEVETTGD