Gene Acid345_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3966 
Symbol 
ID4072439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4693119 
End bp4693625 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID637985993 
Producthypothetical protein 
Protein accessionYP_593040 
Protein GI94970992 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.359315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.361845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTGGA AGCCCAACGC CACCCCCGGT AGCACTGCAA CTCCCGAGCC CATCCGGCCC 
ACGCCGACGC CTGCCCCGAG CGCCGGCCCG GTCATCGAAC CCACGCCCGC TCCCGCCCCG
CGTAACGCCG CGGTGAACAC CGCCGAGCAG GCCACCATCG GCAAGTCGCT CGTCATCAAG
GGCGAGGTCA CCGGCTCCGA ATCTCTCTAC ATTGACGGCC GCGTCGAAGG CTCCATCAAC
CTTCCCGGTA ACCGCGTTAC GGTTGGCCGC AACGGCATCG TTTCCGCCAA CATTAATGCC
CGCGAAGTCG TCGTCCTCGG CAAGGTGAAG GGGAACCTCA CCACCAGCGA TCGCGTCGAC
ATTCGCAACG AAGGCTCGTT GACCGGTGAC GTCGTCGCCC AGCGCATCAG CATTGAAGAC
GGCGCGTTCT TTAAGGGCGG CATCGACATC CGCAAGCCCG GCCAGAAAGA CGCTGATAAG
GAAACCGCCA CCGCGAAGAC CGCGTAA
 
Protein sequence
MMWKPNATPG STATPEPIRP TPTPAPSAGP VIEPTPAPAP RNAAVNTAEQ ATIGKSLVIK 
GEVTGSESLY IDGRVEGSIN LPGNRVTVGR NGIVSANINA REVVVLGKVK GNLTTSDRVD
IRNEGSLTGD VVAQRISIED GAFFKGGIDI RKPGQKDADK ETATAKTA