Gene Acid345_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3960 
Symbol 
ID4072432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4684330 
End bp4685064 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID637985986 
Producthypothetical protein 
Protein accessionYP_593034 
Protein GI94970986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.314146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.565046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA GACGAGCGCT CGGATATGTC CTATTGACAT TTGCAATCCT GTACGTCTTG 
TTCCCTCCCT ACATCCGAGC GCAGCAACAA AAACCAGAGG ACCCGGAAGA TGAAAAGAAC
ATCGGACTCT GGCTGGACCA GGCGATGTCG GTCCCCTTTT CAGCGAGCAA CTCTGTGGAG
GTCGAATTCC ATCAGAGGTT CGACGAAGGC GGATCGCGAT TCTTCGAGCA CTTGGTTCAG
ACCGGCGTTG CTTTTCGTCC GCGGCCTTGG CTGACCGTCA CACCGAGCTA TCGTTATCAG
CGCTTCCCCG GCAATCCCGC GATTGAGTAC GAAAACCGCC TGCTGCTCAA TCTAGCTTTG
AGCACATCGC GAGGTCCGTG GCGCTATAAC CTGCGCACGC TCGTCGAAGG CCGATTTCCA
GACAATCGTC CTGCTTCCGC GCGCCTCCGC TTTCGCCCAG GAATCGACTA CAGTGTGCCT
CTTCGGACAA CGTGGCGTCC GACAGTCGTG GTAAGTAACG AGTTTTTAGT CGTTCCGTGG
TTTAACCCTT TTGCCAATGG CGGTACCAGC TTCACGCAGA ACCGTTTCCA GGTCGGAGTT
CGGTTGCCAA TCTCAGCCAC ACTTTCTATC CGGCCGTATT ACATGCTGCA GTCGGTGAAC
CTCCCTCCAG GCTGGGACAC CAACACAATC GTCGGTATCT CGGTGCTCTT CAAAGCTCCA
AATAAATTCA GGTGA
 
Protein sequence
MSQRRALGYV LLTFAILYVL FPPYIRAQQQ KPEDPEDEKN IGLWLDQAMS VPFSASNSVE 
VEFHQRFDEG GSRFFEHLVQ TGVAFRPRPW LTVTPSYRYQ RFPGNPAIEY ENRLLLNLAL
STSRGPWRYN LRTLVEGRFP DNRPASARLR FRPGIDYSVP LRTTWRPTVV VSNEFLVVPW
FNPFANGGTS FTQNRFQVGV RLPISATLSI RPYYMLQSVN LPPGWDTNTI VGISVLFKAP
NKFR