Gene Acid345_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3952 
Symbol 
ID4072424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4675669 
End bp4676166 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content52% 
IMG OID637985978 
Producthypothetical protein 
Protein accessionYP_593026 
Protein GI94970978 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.040762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.343798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA ATGAGCCCGA GCGGATGGTT GTCACCAGAA TTTTTGATGC CCCACGCGAA 
TTGGTTTGGA AGGCGTGGAC AGACCCGAAA TACGTGATGC AGTGGTGGGG GCCGAAAGGT
TTTACAGCAC CTGTTTGCCA GATAGATTTT CGCGTGGGAG GAAAATTTCT CTTCTGCATG
AGAACGCCGG ATGGGCAGGT GGGCTGGAAT GGCGGTGAAT ACCATGAGAT TGTTCTGCAC
GAGAAGATCG TTTCCTCCAT GTACTTTTCC GACGAGGAGG GAAACAGGCT TGAGCCCGCG
CAATACGGAA GCGAGCATGA GTCCATAGAT GCGTACGACG TGGTCCTGTT TGAGGATCTT
GGAAACGGCC GGACGAAACT CACCTTCATT GGAAATGAAA CCATGCAGAA CGCAATCCAG
AGCGGTCAGT TCGAGGGTTG GAAAGAGACA CTTGATAAAG TTGCCGTCGT TGTTGCGGGG
ATGACGCAGG CGAAATAG
 
Protein sequence
MTKNEPERMV VTRIFDAPRE LVWKAWTDPK YVMQWWGPKG FTAPVCQIDF RVGGKFLFCM 
RTPDGQVGWN GGEYHEIVLH EKIVSSMYFS DEEGNRLEPA QYGSEHESID AYDVVLFEDL
GNGRTKLTFI GNETMQNAIQ SGQFEGWKET LDKVAVVVAG MTQAK