Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3930 |
Symbol | |
ID | 4071313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4643219 |
End bp | 4644529 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637985956 |
Product | glucose/galactose transporter |
Protein accession | YP_593004 |
Protein GI | 94970956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.121013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.215751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTT CAGCGCCGCA AAGTTCCAGC GCCAATAACA GCCAGGACGC TCCCGTAAAA ACCAATTACA GCGCCATGGC CATGGTGACC ACGCTGTTCT TCATGTGGGG ATTTCTCACC TGTCTGAACG ACATTCTCAT CCCCCACCTG AAGGGACTGT TCGACCTGAC TTACATGCAG GTGATGCTGG TGCAGTTTGC CTTCTTTACC TCGTATTTCG TGTTCTCGAC GCCCTCAGGC AAGCTGATTG AAGCGGTCGG ATACAAGCGT GCGATGGTTG CCGGACTCTG CACCATGGGA ATTGGCACGA TTCTGTTCGT GCCCGCGGCG ATGGTGCCTT CGTATCCACT GTTCCTTACG GCCCTCGTGA TTCTTGCCGG TGGCATGACG ATCCTGCAGA CGTCGGCGAA CCCGTACGTC GCGGTGCTCG GACCGCCGAA CACGGCGTCG AGCCGCTTGA ATCTGACCCA GGCGTTCAAT TCGCTGGGAA CGACGGTGGC GCCCTACTTC GGCAAAATCT TGATTCTCGG AGCGGTGGCC GCTCCCGTTG CCGTGGAAGT TTTCCGCAAG ATGGGTGACG CCGAGCGGCA CGCATATCAG GTCGACCAGG CGAGCGCCAT CAAGAACCCG TATATCGGGC TGGCGATTTC GTTGTTTGTA TTGGCTGTGA TCATGGGCTT GTTCAAGCTG CCGGTGATCC GATCGGTCGA GGGGCATGCC GAGGCGGGAG ATTCGATCTG GCAACATAAG CAGCTGGTGC TCGGTGCAAT GGGGATTTTC GTTTACGTTG GCGCGGAGGT TTCGATCGGC AGCTTCCTCG TGAACTACAT GCACGAACCG AACATCGGGA ACCTTACGCT CGAAAAGGCC GCTGGATATC TTACCTACTA CTGGCTCGGC GCGATGGTAG GACGCTTCAT AGGTGCTGCA CTCATGGGGT GGTTGAAACT TAACCCAGGC AAGTATCTCG GTGTCAACGC ACTCTTTGCA GCCCTGCTAG TGATCGCATC GATGCTCAGT GTCGGACACA CGGCCATGTG GGCCATGCTC GCGGTCGGCT TCTTCAATTC GATCATGTTC CCCACCATCT TCACTTTGGG AATTGATGGT CTGGGTCACC TCACCGGAAA AGGCAGCGGC CTCCTCATCG CGGCGATCAT CGGCGGAGCG ATTATTCCAC TGGTTCAGGG CTATTTCGCC GATCGCATGG GCATTCACCA TGCATTCTTC TTGCCGGTGC TCTGTTACGC CTTCATCGCG TACTACGGTT TTGTCGGCTC AAAGCATGGT CATGAGGCCG TGGCGGGTTA A
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Protein sequence | MAISAPQSSS ANNSQDAPVK TNYSAMAMVT TLFFMWGFLT CLNDILIPHL KGLFDLTYMQ VMLVQFAFFT SYFVFSTPSG KLIEAVGYKR AMVAGLCTMG IGTILFVPAA MVPSYPLFLT ALVILAGGMT ILQTSANPYV AVLGPPNTAS SRLNLTQAFN SLGTTVAPYF GKILILGAVA APVAVEVFRK MGDAERHAYQ VDQASAIKNP YIGLAISLFV LAVIMGLFKL PVIRSVEGHA EAGDSIWQHK QLVLGAMGIF VYVGAEVSIG SFLVNYMHEP NIGNLTLEKA AGYLTYYWLG AMVGRFIGAA LMGWLKLNPG KYLGVNALFA ALLVIASMLS VGHTAMWAML AVGFFNSIMF PTIFTLGIDG LGHLTGKGSG LLIAAIIGGA IIPLVQGYFA DRMGIHHAFF LPVLCYAFIA YYGFVGSKHG HEAVAG
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