Gene Acid345_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3922 
Symbol 
ID4071305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4637956 
End bp4638390 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID637985948 
ProductMerR family transcriptional regulator 
Protein accessionYP_592996 
Protein GI94970948 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.856583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.167239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCT CGATGGCAGC CACAAAGAAA ACTCGCTCGA AGAAGAACGA AGAGCTCGTC 
ATTCCCGATA AGCTTTATTT CCGCATCGGT GAAGTTGCGA AGCTGCTCTC GTTGCCCGCG
TACGTGCTGC GCTTCTGGGA AACAGAATTC CCGCAGCTCA AGCCGACCAA GAGCAACACC
GGCCAGCGGA TGTACCGGCG CCGCGAGGTG GACCTTGCGA TCCGCGTGAA GAAGCTGCTC
TACGATGAGG GATTCACGAT CGCGGGAGCG CGCGAGCGAT TGAAGGCCGA GTCGAAGCCG
GCGAAGGCGC AATCCGGGTT GCCGTTCCCG AAGGCTGCAT CGAGCGATGG CCTGCGCGAA
GTGAAGCGCG GACTGACGGA GATCCTGAAT ATCCTGTCAT CCAAGAATGG AAACAAGGCT
CGGGCGAAAG CGTAA
 
Protein sequence
MSPSMAATKK TRSKKNEELV IPDKLYFRIG EVAKLLSLPA YVLRFWETEF PQLKPTKSNT 
GQRMYRRREV DLAIRVKKLL YDEGFTIAGA RERLKAESKP AKAQSGLPFP KAASSDGLRE
VKRGLTEILN ILSSKNGNKA RAKA