| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3920 |
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| Symbol | tdh |
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| ID | 4071303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4634589 |
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| End bp | 4635641 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637985946 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_592994 |
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| Protein GI | 94970946 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.344166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.087716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATA CAATGCTTGC AGTTATGAAA CCCGAGGCCG CTCCAGGCTC GGAGATTCGC
GAAGTTCCTG TTCCTAAATT TGGACCGAAC GAAGTCCTCG TCAAAGTTAA AGTTGCTTCC
ATCTGTGGTA CCGACCTCCA CATTTACAAC TGGGACCAGT GGGCCCAGCG CCGCATTAAG
CCGCCGCTCA TCCCCGGCCA TGAGTTCTGT GGAGACGTGG TTGCGGTGGG TAGTGAAGTA
ACGCTGGTGA AGGAAGGCGA TTTTGTTTCC GCCGAAATGC ACGTGAACTG CGGGAAGTGC
CTGCAGTGCA GAACCGGACA GGCGCATATT TGCCAACACG TGAAGATCAT CGGCGTGGAC
GCGAACGGCG CTTTCGCCGA GTACGTGGTG ATTCCGGAGT CGAACATCTG GAAGCTGGAT
CCGGCGATTC CGCAGGAATA CGCCTCGATT CTCGATCCGC TCGGAAACGC GGTGCACACA
GTGCTCGCGG GCGACATTGC TGCGAAGACC GTTGCGATCA CGGGCTGCGG ACCCATCGGG
TTGTTTTCGA TCGCCGTGGC GAAAGCCTGT GGCGCGACGA AAGTGTTCGC CATCGAAGTA
AATGAACACC GGCGCGCGAT CGCCAAGAAG ATGAAAGCCG ACTTCGTGCT CGATCCCACG
AAGGACAACG TGAAGCAGGT GGTACTCGAT AACACTGAGG GCGTGGGTGT TGACGTTCTG
CTCGAAATGG CTGGACGCCA GGACGCGATC AAACTCGGCT TCTCGATCCT CCGGCTCGGG
GGACGCGCGT CCTTGCTCGG AATCCCTGGC AAGCCCATCG AGATCAACCT CGCGGAAGAC
ATCATCTTCA AGGGCGCGAT CGTGCAGGGC ATCAACGGCC GCAAGATGTA TGAGACCTGG
TACCAGATGG AAGCGCTGCT CAAGGCCAAG ATGCTCGATC TGCATCCGGT GATTACCGAC
AAGATCCCGA TGAAGGACTT CAGCACGGCG ATGGCGCGAT TGCAGAGCGG TGAAGCCAGC
AAGATTTTGA TGTATCCGAA TGGGACGAAA TAA
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| Protein sequence | MPNTMLAVMK PEAAPGSEIR EVPVPKFGPN EVLVKVKVAS ICGTDLHIYN WDQWAQRRIK
PPLIPGHEFC GDVVAVGSEV TLVKEGDFVS AEMHVNCGKC LQCRTGQAHI CQHVKIIGVD
ANGAFAEYVV IPESNIWKLD PAIPQEYASI LDPLGNAVHT VLAGDIAAKT VAITGCGPIG
LFSIAVAKAC GATKVFAIEV NEHRRAIAKK MKADFVLDPT KDNVKQVVLD NTEGVGVDVL
LEMAGRQDAI KLGFSILRLG GRASLLGIPG KPIEINLAED IIFKGAIVQG INGRKMYETW
YQMEALLKAK MLDLHPVITD KIPMKDFSTA MARLQSGEAS KILMYPNGTK
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