Gene Acid345_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3919 
Symbol 
ID4071302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4632900 
End bp4634114 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content59% 
IMG OID637985945 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_592993 
Protein GI94970945 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01825] pyridoxal phosphate-dependent acyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0458222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CAACCCGTAC CAATCCGCTC TCTTACCTTA CCGATCAGAT GAACGAACTG 
AAGGCCAAGG GCACGCATTT CCGTCTGCGC GTACTGGAAG ACGAGCAGGA AGCGGTATGC
ACGTTCGACG GCAAGAAGGT GATCAATCTC GCGTCGAACA ATTACCTCGG CCTGACGACG
CATCCGAAGC TGCGCGAGGC GGCGTTGGAG GCGACAAAGA AGTACGGTGT AGGCTCGGGT
GCGGTGCGGA CGATTGCCGG CACGATGCGC ATCCACATGG AACTCGAGGA GAAAATTGCG
CGCTTCAAGA ACGTCGAAGC TTGCGTTGTC TTCCAATCTG GCTTCGCAGC GAACGCCGGA
ACAGTTTCGG CGATTCTCGG CAAAGAAGAC TTCATCATCT CCGACGAGCT GAACCATGCT
TCGATCATTG ATGGCGCGCG GTTATCTCGA GCGAAGATCC TGGTATTTCG GCACAAGGAC
GTCGCGCATG CCGAGGAGCA GCTCGCGAGC ATAAAAGATC AACCGGGCAA AAAGCTGGTC
ATTAGCGATG GCGTCTTCTC AATGGATGGC GACATCGGGC CGTTGCCGGG GCTTTGTGAC
GCGGCGGAGA AGTATGGCGC GATCATGATG GTAGACGACG CGCATTCGTC CGGTGTGCTC
GGGCGCAACG GCCGAGGCAC GATCGACCAT TTCAATGTGC ACGGGCGCGT GGACGTCCAG
GTGGGAACGC TCTCGAAAGC AATTGGCGCC CTGGGCGGAT ATGTTTGCGG GTCGAAGGAC
CTGATCGATT TCCTCTATCA CCGCGCCCGG CCGTTCCTGT TCTCGACGTC GCATCCGCCG
TCTGTCGCAG CAACGTGCAT CGCGGCGTTC GATGTGCTGG AGCAGGAACC GGAGCGGATC
GAGAAGCTGT GGGAGAACAC GCGCTTCTTC AAGAAGGAAC TCGGGCTGAT CGGATTCAAC
ATTGGTGGCC AGAACACGCC TGCCAGCGAG ACGCCGATCA CGCCGATCAT CGTGGGAGAA
GGACGGTTGG CGATGCAGTT CTCGCGCGAG TTGTTCGACG AGGGCATCAT GGCCACCGGT
ATCGCGTTCC CCACGGTCGC GGAGGGCAAG GCGCGCATCC GGACGATCAT GACCGCGACG
CATACTCACG ATCAGCTCAC GCAAGCGTTG CAGATGCTGA AGCGAGTCGG TAAACGGTTG
GGTATTGTGA ACTGA
 
Protein sequence
MSTTTRTNPL SYLTDQMNEL KAKGTHFRLR VLEDEQEAVC TFDGKKVINL ASNNYLGLTT 
HPKLREAALE ATKKYGVGSG AVRTIAGTMR IHMELEEKIA RFKNVEACVV FQSGFAANAG
TVSAILGKED FIISDELNHA SIIDGARLSR AKILVFRHKD VAHAEEQLAS IKDQPGKKLV
ISDGVFSMDG DIGPLPGLCD AAEKYGAIMM VDDAHSSGVL GRNGRGTIDH FNVHGRVDVQ
VGTLSKAIGA LGGYVCGSKD LIDFLYHRAR PFLFSTSHPP SVAATCIAAF DVLEQEPERI
EKLWENTRFF KKELGLIGFN IGGQNTPASE TPITPIIVGE GRLAMQFSRE LFDEGIMATG
IAFPTVAEGK ARIRTIMTAT HTHDQLTQAL QMLKRVGKRL GIVN