Gene Acid345_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3903 
Symbol 
ID4072240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand+ 
Start bp4617748 
End bp4618380 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content56% 
IMG OID637985929 
Producthypothetical protein 
Protein accessionYP_592977 
Protein GI94970929 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00027123 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0133719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG TGATCACCAT CGAGCGGGAA TACGGCGCCG GCGGAAGCGT GATTGCGGAT 
CAACTTGCCC GGCACTTCGG TTGGGAACTT CTCGACCAGG AACTCACTTC CCGCATCGCC 
GTCGAAGCCA ACGTCTCGCA CTCCGTCGTC AAAAGCTGCG ATGAATGCGT GGACCGTGGA 
TTACGCCGCC TGGCCAAAGT CTTTTGGCGC GGCAGCTACG AACGCATGTT GCCCATGCAG 
GACGAACGCG TGTTCAACGC TGATTGCATG GTGGATTTAG CAACCAAAAT CATCGGAGAG 
GCTGGCGAGG AGGGCCGCTG CGTGATCGTC GGTCGCGGCG CCCCGTACAT TCTTCGTAAT 
CGCAAGGACA CCTTCCACGT ATTCCTCTAT GCCCCGCGCG ACTTCAAGAT CCAAAGACTT 
TCGCACCGTA TGGGTGAAAA GGAAGCGACC GAACTCGTCG ACACGATTGA TCGGGAACGG 
GCTGAGTTCA TCAAACGCTA CTTCAATAAG GATTGGCCTT GCCGGTCGCT CTACCACATG 
ATGATCAACA CCAGTTTCGG CCTCGATTTG GCGGTTGAGT CTATTCTTTC GGCGATGAAA 
ACGCATGAAA TGGCCACGGT TGCGGTTCGT TAG
 
Protein sequence
MFNVITIERE YGAGGSVIAD QLARHFGWEL LDQELTSRIA VEANVSHSVV KSCDECVDRG 
LRRLAKVFWR GSYERMLPMQ DERVFNADCM VDLATKIIGE AGEEGRCVIV GRGAPYILRN 
RKDTFHVFLY APRDFKIQRL SHRMGEKEAT ELVDTIDRER AEFIKRYFNK DWPCRSLYHM 
MINTSFGLDL AVESILSAMK THEMATVAVR