| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3902 |
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| Symbol | |
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| ID | 4072239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4616603 |
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| End bp | 4617676 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637985928 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_592976 |
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| Protein GI | 94970928 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000251706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.03889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGCTT TGCCCGTCCG GTCGTATTGC GAACCTCGCG CTAATCAACG AAAATGCAGT
GTTTCTATGT TGCCCTTCAA GCTCGTTTAT AGCGACCACT ACCGCTTACC TCTGGGCGAG
CATGTGTTCC CCACGCAGAA ATACGAACTC GTAAAACAGG AGCTGCTGGA AGAAGGGGTC
GCCTCGACGC AGGATTTCCT TACGCCGACG CCTGCTACAG AAGCCGATGT TCTGCTGGTG
CACTCCCATT TCTACGTAGA TAAGCTGATC GAAGGAACAT TAACAGCGCG TGAGGAACTG
GCCCTCGAGA TCCCCTACTC CCACGAAGCC GTGCAAGCGT TCTTGTGGCA CACCGGAGGC
ACCATCCTGG CGGCGGAGCG CGCACTTTCC GATGGAGTGG CGTTCAACCT CGGCGGCGGA
TTTCACCACG CGTATCCCGA CCACGGCGAA GGGTTCTGCA TGATTCACGA CGTGGCGGTG
GCGATCAGGA AACTGCAAAA ACAAGGCAGA ATCCAGCGTG TGATGACGCT CGACTGCGAT
GTTCATCAGG GAAATGGAAC TGCCGTAATT TTCGCAAAAC ACAGAGATGA GAATTCCGAG
GCCCTGCCTT CGCGTTCTAC TTCGACGATC GGCAACAGGC TCAGCGGAAC GATGTTGGAG
CGCGGTGCCG ACGATGTCTT CACGATCTCA TTGCATCAGG AGAACAACTA CCCACTGCAA
AAGCCGCCGT CGTCCATAGA CGTCAATCTC CCCGACGGTA CAACAGATTC CGAATACATC
GCGTGGCTCG ACAACGCGAT AAGTTCGGGG TTCCGGCAGT TCCAACCAGA TTTGCTTTGC
TATATCGCCG GCGCGGACCC TTACAAGGAA GATCAACTCG GCGGCCTGAA CCTCACTATT
GACGGTTTGA AACATCGTGA TGAGCTCGTA TTCCAAGCGG CACGCGCAAA GGGAATTCCC
GTCATGGTGA CATTTGCCGG CGGCTATGCG CGCAAGATCC AGGACACCGT GCGGATACAC
CGCAACACGG TCGGGGCAGC GAAGGAAGTT TTCTCAGGAG CAGGGAAGAG CTAA
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| Protein sequence | MAALPVRSYC EPRANQRKCS VSMLPFKLVY SDHYRLPLGE HVFPTQKYEL VKQELLEEGV
ASTQDFLTPT PATEADVLLV HSHFYVDKLI EGTLTAREEL ALEIPYSHEA VQAFLWHTGG
TILAAERALS DGVAFNLGGG FHHAYPDHGE GFCMIHDVAV AIRKLQKQGR IQRVMTLDCD
VHQGNGTAVI FAKHRDENSE ALPSRSTSTI GNRLSGTMLE RGADDVFTIS LHQENNYPLQ
KPPSSIDVNL PDGTTDSEYI AWLDNAISSG FRQFQPDLLC YIAGADPYKE DQLGGLNLTI
DGLKHRDELV FQAARAKGIP VMVTFAGGYA RKIQDTVRIH RNTVGAAKEV FSGAGKS
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