Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3896 |
Symbol | |
ID | 4072231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4611720 |
End bp | 4612466 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637985920 |
Product | hypothetical protein |
Protein accession | YP_592970 |
Protein GI | 94970922 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.250908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0332964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGTT ACAGATACGT TCTTCTTCTA TTCATTTGTT CGGTTGCGTC GATGAGAGCA TTTGCGGGCG ATGCGCCCGC GCCCGTCGTC GTTGAGCTGT TCACTTCAGA GGGATGCTCA AGTTGTCCGC CAGCGGATCA GTTGCTAGCG GACCTTGTCG CTGCGAATGC GCCTGGACGA CCTGAGGTGA TTGCGCTTGG TGAACACGTG GATTACTGGA ACCACGATGG GTGGACCGAC CGCTTCTCTT CGCGACAATT CACTGACCGT CAAAACAACT ATGCGCAGAA ATTCAAGCTG GATTCTCCCT TCACGCCACA GATGGTGATT GATGGAAATC AGCAGGTGAG TGCAAACGAT AAGTCTGCAG TCGTGCACGC GATCCTCGCT GCCGCACAGC AGGCGCCCTC GGCGAAGGTG AACCTGCGCC TCAGCTCCGC CGCGCGTCTC AACGTCGAAG TTCAGTCCGA CCATCACTCC GACGACATCT TCCTGGTAAT CACCGAAGAC GGACTCAAGA CAGAAGTGCG CAACGGCGAG AACAAGGGAC GGACTCTTAC TCACGTCGCC GTCGTTCACC GCCTCGAGAA GATTGGCTCT TTGTCGAAGG AAGGTTTCTC GAAGGAGATC AATCTTGCGC TGGACAAGTC CTGGAACCCT AAGAGCACCA GAGCCGTTGT CTTTGTACAA GAGAAGAACT CCGGAGCGAT CATCGGCTCC GCGTCGGTAC CGCTCGCGAG CAACTGA
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Protein sequence | MRSYRYVLLL FICSVASMRA FAGDAPAPVV VELFTSEGCS SCPPADQLLA DLVAANAPGR PEVIALGEHV DYWNHDGWTD RFSSRQFTDR QNNYAQKFKL DSPFTPQMVI DGNQQVSAND KSAVVHAILA AAQQAPSAKV NLRLSSAARL NVEVQSDHHS DDIFLVITED GLKTEVRNGE NKGRTLTHVA VVHRLEKIGS LSKEGFSKEI NLALDKSWNP KSTRAVVFVQ EKNSGAIIGS ASVPLASN
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