Gene Acid345_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3896 
Symbol 
ID4072231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4611720 
End bp4612466 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content56% 
IMG OID637985920 
Producthypothetical protein 
Protein accessionYP_592970 
Protein GI94970922 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.250908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0332964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGTT ACAGATACGT TCTTCTTCTA TTCATTTGTT CGGTTGCGTC GATGAGAGCA 
TTTGCGGGCG ATGCGCCCGC GCCCGTCGTC GTTGAGCTGT TCACTTCAGA GGGATGCTCA
AGTTGTCCGC CAGCGGATCA GTTGCTAGCG GACCTTGTCG CTGCGAATGC GCCTGGACGA
CCTGAGGTGA TTGCGCTTGG TGAACACGTG GATTACTGGA ACCACGATGG GTGGACCGAC
CGCTTCTCTT CGCGACAATT CACTGACCGT CAAAACAACT ATGCGCAGAA ATTCAAGCTG
GATTCTCCCT TCACGCCACA GATGGTGATT GATGGAAATC AGCAGGTGAG TGCAAACGAT
AAGTCTGCAG TCGTGCACGC GATCCTCGCT GCCGCACAGC AGGCGCCCTC GGCGAAGGTG
AACCTGCGCC TCAGCTCCGC CGCGCGTCTC AACGTCGAAG TTCAGTCCGA CCATCACTCC
GACGACATCT TCCTGGTAAT CACCGAAGAC GGACTCAAGA CAGAAGTGCG CAACGGCGAG
AACAAGGGAC GGACTCTTAC TCACGTCGCC GTCGTTCACC GCCTCGAGAA GATTGGCTCT
TTGTCGAAGG AAGGTTTCTC GAAGGAGATC AATCTTGCGC TGGACAAGTC CTGGAACCCT
AAGAGCACCA GAGCCGTTGT CTTTGTACAA GAGAAGAACT CCGGAGCGAT CATCGGCTCC
GCGTCGGTAC CGCTCGCGAG CAACTGA
 
Protein sequence
MRSYRYVLLL FICSVASMRA FAGDAPAPVV VELFTSEGCS SCPPADQLLA DLVAANAPGR 
PEVIALGEHV DYWNHDGWTD RFSSRQFTDR QNNYAQKFKL DSPFTPQMVI DGNQQVSAND
KSAVVHAILA AAQQAPSAKV NLRLSSAARL NVEVQSDHHS DDIFLVITED GLKTEVRNGE
NKGRTLTHVA VVHRLEKIGS LSKEGFSKEI NLALDKSWNP KSTRAVVFVQ EKNSGAIIGS
ASVPLASN