Gene Acid345_3895 details

Gene Information

• Locus tag: Acid345_3895
• ID: 4072230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: -
• Start bp: 4607876
• End bp: 4611325
• Gene Length: 3450 bp
• Protein Length: 1149 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637985919
• Product: TonB-dependent receptor
• Protein accession: YP_592969
• Protein GI: 94970921

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.0561409
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGGAT CAAGAGCAAG GTACACACTT CTGTGCGCGC TGCTATTTCT GTGTTCCGCC 
ATGTTGTTTG GTCAGGCGGA GACAGGTTTG ATCACAGGCA CCGTCGTGGA TGTTTCCGGC 
GCAGTTGTCG GCGGAGCGAC GGTGACAGTG ACGGACGTGA ATACGGGCGC GCAGCGAACC 
GCTACCACCA ATAACGATGG TTCCTACACG GTTTCCAACC TCAAACCGTC GATGTACGAA 
GTCGTGATCG ACAAGCAAGG CTTCACCAAA TACACCCGCA GGATCGCGGT GACCGTCGGA 
TCAAGAAATG AACTTTCGGC GCAGATGAGT GTGATGGGCG GCGGTACTAC CGTCGAAGTG 
ACCGCGGAAT CAGGCGGCGC CGCGGTGAAC ACCGAAACCC AGACGCTTTC ATCGGTCGTG 
AGCGGCGCGC AGATCACCGA ACTCCCAACT CTCACCCGCA ATCCATACGA CCTCGTTGCC 
ACCGCCGGCA ACGTGACAGA AGACACCACC GGTACCATGC GCGGTGCAGG CTTCTCGATC 
AACGGTCAGC GCTCAGCATC AACCGATGTA CTGTTAGACG GTGGTGAAAA TGTCGATATG 
TTCACCGCTT CCGTCGGGCA GCAGGTTCCG CTCGATTCCG TGCAGGAATT TCGCGTTGTC 
ACCAGCAACT TCACCGCAGA ATATGGCCGC GCGGGCGGCG GCGTCCTGAA CGTCGCTACC 
AAATCTGGCG CCAATGCCTT CCATGGCACC GCGTATGAGT TCAACCGCAT ATCTGCGCTG 
GCGGCGAACA CCTGGGAGAA CGACACCAAC GATATCCCCA AGTCCACGTT CACGCGCAAT 
CAGTTCGGAT ATTCGGTGGG TGGGCCAATC ATCAAGAACA AACTGTTCTT CTTCTCCAAC 
ACCGAATGGA TCCGGGTCCG CAGCAGTTCG AACCAGATCG TCTCGATCAT TGATCCTGCG 
ATGTTCCCGA ACCTGGCTCC GAACTCGGTA GCTGCGCTGT CGTATGCTGA CGTGCGCTCG 
AACGCGACTT TGCTCGGCTC TACCTCATGC GCAGCCGATG CTCTGTGCTC CCCTCTGCTC 
GCGAGCAATG GCGGACCGTT GCCCAATGGC TCGCCGTTCA CCCAACAGTT GTCGTACACG 
GCGCCCGCAG AGGCAGGTGG CGGCCTTCCG GAAAACACCT GGATGACCGT CAACCGCTTC 
GACTACAACA TGACCGACAA AACCACCTTC TTCGGCCGCT ACGCTGGATA CCACGAAGAG 
GATTTCAACG GGACCGTCAA CAGCAGCCCG TACTCCGAGG GATTCGATAC CGGCCAGAAC 
ATCTTCAACA ACAACGTGCT TATCAACATG ACGCACGTGT TCACTCCCAA CATCGTGAGC 
CAGTCGAAGT TTGATTTCAA CCGACTGAAC TTGCTGCAAC CGCTCGGAAC CCAGCCCGTG 
GGGCCAACGA TGTACGTCTC CTCGCAAGGC GTGCCCACCT CCGGCGGATA CTCGCTGATT 
TTCCCCGGAT ATAGCGAATT CACGCCAGGT AACTCAATTC CATTCGGCGG CCCGCAGAAC 
CTCTATCAAT TCTTCCAGGA TGTCTCATGG ACGAAAGGTC GTCACCAGCT GCGTTTTGGC 
GGACAGTACA TTCACATTCG CGATAACCGC ACCTTCGGCG CTTATGAAAA CGCTGTGCAG 
TATCTCAGCA CGGGCGCACC CGTGACCGCG GGTGGAAATA CTTATCGCGG CAACACCGCC 
GGCATTTACA ACCTAGTCGC CGGCAACATC GCGAACATGC AAGTCGCGGT TGACCCTCGC 
GGAGCGTTCC CCGGAGACAA CATCTCTCTT CCGGCAGGCG CACCGAGCTT CTCGCGTAAC 
AATCGCTTCA ACGACGGCGC GTTCTACCTC CAGGATTCCT GGAAAGTAAC CAGCCGCTTG 
ACGCTCAACT ACGGCGTGCG CTGGGAGTAC TACGGTGTGC AGCACAATGC CGATCCCTCG 
CTCGATTCCA ACTTCTACGA AGGGTCCGGT GCGACGCTGC CGATCCAGGT TGAGAACGGG 
ACCGTGCAGA TTGCCAATCA GAGCCCGGTC GGCTCTCTCT GGGAGCCTTC CAAACACAAC 
TGGGGTCCGC GCCTCGGCTT CGCCTGGGAC GTCTTCGGTG ATGGCAAAAC GGCGATACGC 
GGTGGTTGGG GCATGAGCTA CGAGCGGAAC TTTGGCAACG TGACCTTCAA TGTCATTCAG 
AACCCACCGA ATTACGCAGT TCTGAATGCA GTGAACACGC CCGTGACGCT CGACAACTTC 
GGGCCTCTCT CCGGCAGCAG CGGCAGCGTA GTTCTTCCTC CAACCACTCT GCGTGCCGTG 
CAGCCCAACA TTGACAACGC GTACACCGAG TTCCGCAGCC TATCGCTGGA ACGCGAGGTA 
CTAAAAAATA GCCTGGTTGC CTTTGAATAC AGCGGCTCGA ACGGCGTTCA CCTGTATGAC 
ATCGGCAACA CGAACGTGTT TTTCCCGGGG TATGCTGGCT ACGGTGATTA CTTCGATCCT 
GCTACCTATC ACTCTGGAGT TGCGTGTTAT CCCGGATGCC GCCTGAACCA GCAGTATTCG 
AACATCAACA GCCGTGGCAG CCGCGGATTC TCGCGCTACA ACGGCCTGAA CACACGCTTC 
ACCACCAACA ATCTCTTCAA CAAAGGTCTG CAGCTCAACT TCAACTGGAC GTGGTCACAC 
TCGATTGACA ACTTGAGCTC AACCTTTAGC GAAGGCAACA ACGGCGCGTT CCAACTCGGT 
TACGAAAACT ACTATGCTCC GCAACTCGAC ACCGGCAATT CCGAGTTCGA CGTCCGTCAC 
CGCATCGCGG TTAGCGCAGT CTGGGACCTG CCCTGGATGA AGAACGCGAG CAATGCGTTC 
GTTCGCCAGG CGCTCGGTGG GTGGAGCTTT TCTCCCCTGA TCACCTACCA TACCGGCTAC 
CCGTTTTCGG TCTATGACTG CACCAACGGA ATCAGCCAGT GTCCGCGCTA CTTGCCGACG 
GGTGGTGAAC GCGACGGCTT CGCCAATTCA TCAACCTACG CTGGTGGAGG CGTCTTCAAT 
TACCTGAATG CCGGCTCGCT CGTCGCAGCT CCTGGCTTCG GAATGCCGGG TGTCGGCGGT 
TCGAGCCAGG TTCCGGAAGC GCCTTGCCAG GGAGCGATCG GATGCAACTG GGCCGTCGGT 
CCGCGCAACA TGTATACCGG CCCCGGCAAT CACCAGTTCA ACGCGGTTAT CGGGAAGACG 
TTCAAACTCA CCGAACGGTT CAACTTGCAG TTCCGCGGCG AGATGTACAA CGTCTTCAAC 
AACCACAACT ACTTCCTGCT CACGTCGAAC GCCGACGTCA GCAGCGGTGC GCTGGGAAGC 
CCGTTCTTCG TACAAGCTGT TAAGGGCGGC TTCGGCAATC CGACGGACGA ACGTCGTAAT 
GTTCAGTTCG GCTTGAAGTT GATTTTCTAA 

 

Protein sequence

MIGSRARYTL LCALLFLCSA MLFGQAETGL ITGTVVDVSG AVVGGATVTV TDVNTGAQRT 
ATTNNDGSYT VSNLKPSMYE VVIDKQGFTK YTRRIAVTVG SRNELSAQMS VMGGGTTVEV 
TAESGGAAVN TETQTLSSVV SGAQITELPT LTRNPYDLVA TAGNVTEDTT GTMRGAGFSI 
NGQRSASTDV LLDGGENVDM FTASVGQQVP LDSVQEFRVV TSNFTAEYGR AGGGVLNVAT 
KSGANAFHGT AYEFNRISAL AANTWENDTN DIPKSTFTRN QFGYSVGGPI IKNKLFFFSN 
TEWIRVRSSS NQIVSIIDPA MFPNLAPNSV AALSYADVRS NATLLGSTSC AADALCSPLL 
ASNGGPLPNG SPFTQQLSYT APAEAGGGLP ENTWMTVNRF DYNMTDKTTF FGRYAGYHEE 
DFNGTVNSSP YSEGFDTGQN IFNNNVLINM THVFTPNIVS QSKFDFNRLN LLQPLGTQPV 
GPTMYVSSQG VPTSGGYSLI FPGYSEFTPG NSIPFGGPQN LYQFFQDVSW TKGRHQLRFG 
GQYIHIRDNR TFGAYENAVQ YLSTGAPVTA GGNTYRGNTA GIYNLVAGNI ANMQVAVDPR 
GAFPGDNISL PAGAPSFSRN NRFNDGAFYL QDSWKVTSRL TLNYGVRWEY YGVQHNADPS 
LDSNFYEGSG ATLPIQVENG TVQIANQSPV GSLWEPSKHN WGPRLGFAWD VFGDGKTAIR 
GGWGMSYERN FGNVTFNVIQ NPPNYAVLNA VNTPVTLDNF GPLSGSSGSV VLPPTTLRAV 
QPNIDNAYTE FRSLSLEREV LKNSLVAFEY SGSNGVHLYD IGNTNVFFPG YAGYGDYFDP 
ATYHSGVACY PGCRLNQQYS NINSRGSRGF SRYNGLNTRF TTNNLFNKGL QLNFNWTWSH 
SIDNLSSTFS EGNNGAFQLG YENYYAPQLD TGNSEFDVRH RIAVSAVWDL PWMKNASNAF 
VRQALGGWSF SPLITYHTGY PFSVYDCTNG ISQCPRYLPT GGERDGFANS STYAGGGVFN 
YLNAGSLVAA PGFGMPGVGG SSQVPEAPCQ GAIGCNWAVG PRNMYTGPGN HQFNAVIGKT 
FKLTERFNLQ FRGEMYNVFN NHNYFLLTSN ADVSSGALGS PFFVQAVKGG FGNPTDERRN 
VQFGLKLIF