| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3892 |
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| Symbol | |
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| ID | 4072227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4604301 |
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| End bp | 4605779 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985916 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_592966 |
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| Protein GI | 94970918 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.179019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.485504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTC GTCCTTCATC GGCAGTGCCA ATGATCGGAG TCGATCGTCA TGCCGCACTG
CCGCTGCATC GGCAGTTGTA TGAGAGCTAT CGCTCGGCCG TCCTCGGCGG CCGATTGCGG
CCGGGGCAGA TGGTGCCCTC CACCCGCGCG TTGGCAATGG AGTTGGAAAT CTCCCGAATG
CCGGTGTTGA CGGCATACGC ACAACTGCTC GCGGAGGGAT ATTTCGAAAC GCGCTCCGGG
ATCGGAACCG TCATCAGCGA GGCACTGCCC CAGCAACGTT CGGTGGCGGG CAAAGCGCAG
ATTCCGCCTC CAATCGAGCC CGGTCCGCGG AATGTCTCGT CGCGATGTTT GACGCCCTAC
CGGCCCTTCC TGCCTCCCTG GATCGCGGGG AGAGGCGCGT TCAACGTGGG AGGCGTGGCG
CTGGAACACT TCCCGCATCG TACCTGGACG CGACTGGTCG CGCGCAGCGC GCGCAACGGC
GCGGGCATTG GTCCGGCGCG CGACGTGATG GGGTCGATCG AGTTACGCGA AGCGGTTGCC
GATTATCTGC GGACGTCTCG GGCTGTGAAT TGCACGGCCG ATCAGATCAT GATCACGAAC
GGCTCACAGA ACGGCGTGGA ACTCACAGTG CGCGCGCTGC TCGATCCCGG TAGCGCGGTC
TGGATGGAAG AGCCTGGTTA CCAACTCGCA CGCGACGTGC TGAGCATGGC GGGATGCCGC
ATCGTGCCGG TGCCAGTGGA CCAGCAAGGC ATCGATGTGG TGCGCGGAAT CAAGATGTGT
CGCAATGCTC GCGCTGTGAT CGTTACCCCG TCACACCAAT TCCCTCTTGG GATGACGATG
AGCGTTTCGC GCCGGTTGGA GTTGCTGGCT TGGGCGTCGA AGCAAGGTTC ATGGATCATC
GAGGACGATT ACGACGGCGA ATTTCGGTAT GAGAGCAAGC AGATCGCGTC GTTGCAAGGC
CTCGATCGCG ACGGCCGCGT GATTTATATC GGTACGTTCA GCAAAGTGTT GTCATCTGCA
CTGCGCATTG GCTATGTGGT GATTCCGCGC GACCTGGTGC CGCACTTCAT GCGAGTTCGG
TGGTCTACCG ATCTTGGCTC AGAAGAGCTG ATCCAGACGG TCGTCAACGA CTTCCTGCGT
GAAGGCCATT TTGCGCGACA CCTGCGGAAC ATGCGCCTAA CCTATCGCGA ACGGCGGAGC
GTGTTGGTGG AGTCTCTCGA GAAGACGCTC GGAGGCGAGG CTGAAATCGT GGGAGCAGAG
GCGGGGTTAC ACCTGGTCGT GCTTCCAAAA GGCCTGAAGG ACGACGTGGA GATTTGCAAG
GCAGCGGCAC GGGAGCCACT GTGGCTGTGG CCGCTTTCAC ACTGCTATCA CGGTCCAGCC
GCAAAGCACG GGTTTGTCCT CGGCTTCGGC GGGACACCGC CAGAGAGAAT TCCGAGGGCG
GTGAAGCAGA TCCGCGAGGT GTTGCGCGGA CGGAGATAA
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| Protein sequence | MSSRPSSAVP MIGVDRHAAL PLHRQLYESY RSAVLGGRLR PGQMVPSTRA LAMELEISRM
PVLTAYAQLL AEGYFETRSG IGTVISEALP QQRSVAGKAQ IPPPIEPGPR NVSSRCLTPY
RPFLPPWIAG RGAFNVGGVA LEHFPHRTWT RLVARSARNG AGIGPARDVM GSIELREAVA
DYLRTSRAVN CTADQIMITN GSQNGVELTV RALLDPGSAV WMEEPGYQLA RDVLSMAGCR
IVPVPVDQQG IDVVRGIKMC RNARAVIVTP SHQFPLGMTM SVSRRLELLA WASKQGSWII
EDDYDGEFRY ESKQIASLQG LDRDGRVIYI GTFSKVLSSA LRIGYVVIPR DLVPHFMRVR
WSTDLGSEEL IQTVVNDFLR EGHFARHLRN MRLTYRERRS VLVESLEKTL GGEAEIVGAE
AGLHLVVLPK GLKDDVEICK AAAREPLWLW PLSHCYHGPA AKHGFVLGFG GTPPERIPRA
VKQIREVLRG RR
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