Gene Acid345_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3890 
Symbol 
ID4072225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4601857 
End bp4603287 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content60% 
IMG OID637985914 
Productbeta-lactamase-like 
Protein accessionYP_592964 
Protein GI94970916 
COG category[R] General function prediction only 
COG ID[COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.493871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACA TCCAATTCCT CGGCGCCGCG GGCGTCGTCA CCGGTTCCAA ACACCTCGTC 
AACACCGCTG CCGATGAATC CGGCACCCGC GGTTTCCAAC TGTTGATTGA CTGCGGTCTT
TTCCAGGGCC AAAAAGAATG GCGCGAGCGC AACTGGCGCG ACACTCCAAT CCCCGCGCGT
GAGATCGATG CCGTCGTCCT CACCCACGCG CATCTCGACC ACACTGGCTG GATCCCGCGC
CTGGTGAAAG AAGGTTTCAC CGGCCCCATC TACGCCACAT CGGCCACCGT GGATCTCTGC
GGTGTCATCC TGCCTGACAG CGGACACCTC CAGGAAGAAG ATGCGGCGTT CCATAACAAG
ATCAAGAGCT CGAAGCACGA CCCGGCTCTG CCGCTCTACA CCATGCAGGA AGCGCTCGAC
AGCCTAAAGC TCTTCAAGGC CGTGGACTTC GAGAAGCAGA CCGATGTCTC ACCCGAGCTG
AGCTTCCGCT ACGTCCGAGC CGCGCACATC CTCGGCTCCT CGATGGTGGA GCTCACCGTG
AAGCAGAACG GCTCCTCGAA GCTCGTACTC TTTTCCGGCG ACATCGGGCG CGTTCGCGAC
ACGGAGGTTG CGCCCGGCAA AGTCGTGCGC TCCGGTCCCT ATGAAGGCGA ATCCGCCGAC
ATCGTTGTGA TGGAATCCAC CTACGGCAAT CGCGAGCATC CCAAAAACGA CCCGCGCCCC
GAGATGGCTA AACTCATTCG CGACACCGTC GGCCGCGGCG GCTCCGTTGT CGTTCCCGCC
TTCGCCGTCG AGCGCACGCA GAAGCTGGTC TTCATGGTGA AGCAGATGAT GGAGAACAAC
GAGATTCCCA AAGTTCCCGT TCACTGCGAC AGCCCCATGG CGATCAAGGC CGTCGAGATC
TTCCTTAAGC ACGAAGAAGA ATTCACCGAC GAAACCAAGC GCCTCATCGA TCAATACGGC
AGCCCGCTCA CCTGGCCAGG CTTTTACTTC GACACCACGC AGCAGGAATC GAAGAAGATC
AACAACTCGA ACTATCCTCA GATCATCATC TCGTCGAGTG GCATGGCCAC CGGAGGCCGC
ATCCAGCATC ACCTCGCGCA GCGCCTCCCG GATCCCAAGA ACCTTGTGCT CTTCATCGGA
TTCCAGGCAC CCGGGACACG TGGTCGCCAG ATCAAAGACG GCGAGAAAGA AGTGAAGATT
TTCGGCCAGA TCGTTCCCGT CCGCGCCCAG GTCGCCACCC TCGAACAGTT CAGCGACCAT
GCCGACACGA GCGAGCTTCT TGAATGGCTA CATACGTTCA AGAAGGCGCC ATCGCAAACC
TGGCTCGTCC ACGGCGAGCC CGACGCCGCG CAGAAACTCC GAGACGCGAT GATCAAAGCG
CTGCACTGGA ACGTGAACGT AGCGCAGTGG ATGCAAAAAG CCCCGGTATA G
 
Protein sequence
MTYIQFLGAA GVVTGSKHLV NTAADESGTR GFQLLIDCGL FQGQKEWRER NWRDTPIPAR 
EIDAVVLTHA HLDHTGWIPR LVKEGFTGPI YATSATVDLC GVILPDSGHL QEEDAAFHNK
IKSSKHDPAL PLYTMQEALD SLKLFKAVDF EKQTDVSPEL SFRYVRAAHI LGSSMVELTV
KQNGSSKLVL FSGDIGRVRD TEVAPGKVVR SGPYEGESAD IVVMESTYGN REHPKNDPRP
EMAKLIRDTV GRGGSVVVPA FAVERTQKLV FMVKQMMENN EIPKVPVHCD SPMAIKAVEI
FLKHEEEFTD ETKRLIDQYG SPLTWPGFYF DTTQQESKKI NNSNYPQIII SSSGMATGGR
IQHHLAQRLP DPKNLVLFIG FQAPGTRGRQ IKDGEKEVKI FGQIVPVRAQ VATLEQFSDH
ADTSELLEWL HTFKKAPSQT WLVHGEPDAA QKLRDAMIKA LHWNVNVAQW MQKAPV