| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3887 |
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| Symbol | |
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| ID | 4072222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4596966 |
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| End bp | 4599389 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985911 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_592961 |
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| Protein GI | 94970913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAT TGCTGCAGGA TGTGCGGTAT GGGTTCCGCG GGCTTCGGAA GAGTCCCGGA
TATGCGTTGC TGGCGATTGC TGCGCTGGCG CTGGGAATTG GCGCCAACAC TGCGTTGTTC
AGCGCAATTT ACGGCATTCT GCTGAAGCCG CTGCCATATG CGAACGGCAA GCGCCTCGTC
CTGTTGCAAC AGTCGGCGCG CAGTGCGACC TCGCCGAAGT TAGCGGTGTC GGTGCAGGAG
CTTGAGGACT ATCGGAAGCA GGCGCATTCG TTCGATGGCT TGGTCGAGTA TCACTCGATG
CAGTTCATTC TGCTTGGCCG CGAACCGGAC CGCGTGGAGA CCGGGGTCGT CTCGGCGAAC
TTCTTCGATG TGCTCGGCGT GAAGCCGCTT CTTGGACGGA CATTCCGCGC CGGAGAAGAC
CTGGTGGGCG CGGAGCCAGT GCTGGTGCTG AGCTACAAGT ACTGGCAGGA GCACCATGGC
GGCGATCCGA ACATCGTGGG CAAATCGTTT CGGATGAACG ACAAGTTGCA CACTGTGATT
GGTGTGCTTC CGCCGATCCC GCAGTATCCG AGAGAGAATG ACGTGTACAT GCCGGTGTCG
GCGTGTCCGA CTCGGATGAG CGCGCACATG CTGGAGAACC GCGCGATGCG CATGCTGAAC
GTGTTCGGCA TCCTCAAACC AGGCGTGACC CTGGAGCAGG CAAATGCGGA AACCAGCACA
ATCGCGGCCC GCTTTACACA GCAGTACCCG AATGCCTACC GGCTTGACCA CTTTGCGGTG
CACATTGATT CGCTGCAGAC GATGTTGACT ACCAGGGCAC GGCCGCTGCT GATAATGCTG
CTGATTACGT CCGCCCTGGT GCTGGTGATT TCTTGCGCAA ACGTGGCGAA CCTTGCGCTG
GCGCGCATGA CGCAACGCGA ATACGAGATG GCGATTCGCA GCTCGCTCGG CGCACCGCGT
ACGCGGCTGA TCCGGCAAGT GCTCACGGAA TGTACGCTGC TAGCGATTGC GGGTGGTCTG
GTGGGACTTT TGTTTGCGCA GGTAGGAACT CACCTGCTTT CTATCTTCCT GGCGAGATTC
ACGACGCGCG CAGCCGAAGT GCAGATCAGT GGAGCGGTCC TGGCGTTCAC GATGGTGGTT
AGCATAGCGA CGGGCCTGCT GTTCGGCCTG GCGCCGGCGC TGAACAGCAC GCGGCGTCTT
GCGGGCCAGA TGCAGACCGG TGCGCGCAGT TCCAGCGCCG GGCACATGGG ATGGTCTCTC
CGTAGCGCGC TGATCGTAGC GCAGGTGTGC ATCAGCTATG TACTGCTGGT GATTGCAGGG
CTCACTCTGC GCAGCTTCGA CAAGCTGCAG AAGGTCGACG CTGGGTTCAA TGCGGAGAAC
GTGGTTGCGT TCACGCTGCC CGTCAACTTC ACGAAATATG CAGAACCAGT CAAGTTCGCC
GAGTTGGAAC AACGGGTGAA GCAGCGGATT GAGCAACTGC CGGGTGTAAC GTCGGCGGCG
TCCATTTCGG GACTGCCATT GGGGAGCACA TCCCCCACGC CGCAGCCGAT GATGATTGAG
AAACAGGTGA AGGACCCGAA CGCGCCTAAC GTGGAAGTGG ATGCGTCCGC AGTGTCGCCG
AATGCGTTCT TTACGCTCGG TGTGCCGTTT ATGGCGGGCC GAGATTTCAA CGCCCTGGAT
ACGACCAAGT CGGAGAACGT GACGATCTTC AGCGCCTCAA CGGCGAAGCG GTACTTCGGC
AACGAAGATC CGGTTGGGCG GCGCGTTTCC TACGACAACG GGGAGAACTG GTGGCGCATT
GTTGGCGTGG TGGGCGACGT TCGCTATTTC GGACTGGATC GGCCACCAAT TGACGAAGTG
TACGTTCCCG CGGCACAGAT CGGGGGAGCC GGCAGGTTCG TTGTCCGCAC AACGATGGAC
GAGGATGCGG CCCGGAGCCT GTTTACGAAA GCCGTGCGCG AGCTCGATAA CGAACAGCCA
GTGACCGACT TCAAGACTTT GCGAGAAGTA CGCGACGATT CGCTGACGAA CACACGAGTG
ACCTCAATGC TGTTGACCTT GTTTGCAGGG TTGGCTCTGG TGCTCGCAGC AACTGGACTC
TTCGGCGTGA TTTCGTTCCT GGTGAGCCAG CGAACGCGTG AGATCGGCAT ACGGCTCGCG
ATGGGTGCGC AGACGTCGTC GGTGCTGGTG ATGATGTTGC GGCAGGGCGT GAACCTGGTG
GCGATCGGGC TTGGACTCGG CGTAATCGCG GCGCTGGCGG CGAGCAACGT GGTGAAGAGC
TTGTTGTTTG GTGTCTCGAC GCGCGATTGG ATTACGTTTG TGGGAGTGGG CGCAGTGTTG
TTTGGAAGTA CGTTGCTGGC GAGCTATCTG CCGGCGCGAC GTGCCGCGAA AGTGCAGCCG
ATGGAAGCGC TGCGATGCGA GTAG
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| Protein sequence | MRSLLQDVRY GFRGLRKSPG YALLAIAALA LGIGANTALF SAIYGILLKP LPYANGKRLV
LLQQSARSAT SPKLAVSVQE LEDYRKQAHS FDGLVEYHSM QFILLGREPD RVETGVVSAN
FFDVLGVKPL LGRTFRAGED LVGAEPVLVL SYKYWQEHHG GDPNIVGKSF RMNDKLHTVI
GVLPPIPQYP RENDVYMPVS ACPTRMSAHM LENRAMRMLN VFGILKPGVT LEQANAETST
IAARFTQQYP NAYRLDHFAV HIDSLQTMLT TRARPLLIML LITSALVLVI SCANVANLAL
ARMTQREYEM AIRSSLGAPR TRLIRQVLTE CTLLAIAGGL VGLLFAQVGT HLLSIFLARF
TTRAAEVQIS GAVLAFTMVV SIATGLLFGL APALNSTRRL AGQMQTGARS SSAGHMGWSL
RSALIVAQVC ISYVLLVIAG LTLRSFDKLQ KVDAGFNAEN VVAFTLPVNF TKYAEPVKFA
ELEQRVKQRI EQLPGVTSAA SISGLPLGST SPTPQPMMIE KQVKDPNAPN VEVDASAVSP
NAFFTLGVPF MAGRDFNALD TTKSENVTIF SASTAKRYFG NEDPVGRRVS YDNGENWWRI
VGVVGDVRYF GLDRPPIDEV YVPAAQIGGA GRFVVRTTMD EDAARSLFTK AVRELDNEQP
VTDFKTLREV RDDSLTNTRV TSMLLTLFAG LALVLAATGL FGVISFLVSQ RTREIGIRLA
MGAQTSSVLV MMLRQGVNLV AIGLGLGVIA ALAASNVVKS LLFGVSTRDW ITFVGVGAVL
FGSTLLASYL PARRAAKVQP MEALRCE
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