| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3884 |
|---|
| Symbol | |
|---|
| ID | 4072219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4591970 |
|---|
| End bp | 4593973 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637985908 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_592958 |
|---|
| Protein GI | 94970910 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTG CCCCCCGTAA ACAATCGCGC GCCCAACGAC TCTTCCAGCG CGGAGCCGCG
CTCGCTGCCG TCTTCACGGC AGTGCTACTC ATTGGTGTCG AAAATACCAA GCCCATGCGG
TGGCTCGAAA CCGGCACCTA CGACGCGCGT ATGACGTGGA GCCTCGATCC CTCACGTGCC
GATAAAAGCA TCGTCATTCT CGACATCGAC AACCCCAGCT TCGAGATCCT GAAGGAAAGC
TTCGGACGCT GGCCCTGGAC GCGTATGGCA TGGGCCGGCG CCATTGATTA CATGGCCGAC
GGCCACCCGA AAGTCATCGC CTTTGACTTC AAGTTCGGTG GCAGCGAAGA CCCCAAAGTC
GACCAGGCCT TCGCCGAATC CATTCGCAGC GGCCGCAATG TTCTCCTCGG CTTCTCCTTC
GATCCCGCGC AGATCGAGGA CGTCTCCGAC GTGAAGAACC GCAAGCTCGC GCTCCTCGCC
CGCGAGTCTC TCAGCGACAG TCACATCCTC GGCGAACATT TTCCTCCCGC GGACCAGAGC
CTCAACGTTC CGCTCGACAT TCTCGCCAAA GCTTCCGCCG GTATGGGCTG CCTCAACGCC
GTTTATGACG ACGATGGCGC CGTGCGCCGC ATGCCGCTCG GCTGCAACTA TGGCGACCTC
GCCTTCCGTA CCCTCGACAC TCGTGCTGTG GACTACGTTC GTGGCCACGA TGCCAGCCGC
TTCATCCGCG ACGGCCGCTA TGGCGACAGC ACCGGCGAGC GTATTCCCGT CGATGCCAAC
GGTCATCTCC TGGTCTGGTT TCATGGTCGT CCGCACGGCA CTTACGAACG GGTTCCTTTC
TGGAAGCTGG TATGTTCCGC CGCGCCCGAC AGCTGTCCGA ACCTGAAGGA GCCGATTCCG
CCTTCTTACT TCAAGGACAA GATCGTCCTC GTGGGCGCCA GCGCATCGGG GAGCTTTGAG
CTTCATTCCA CGCCCGTAGG CGATGCGCCG GGTGTGTTCG ATCGCGCTGC TGCCATCGAC
AACCTGCTGC ATGGCGAAGG CATATTGATC GCGCCGCTCT GGCAACACTG GATCCTCATC
GCCATCATGG CGCTGGTCGG CTGGATGGTG CTCACGCGTC TCGGCGTTAG CGTCGTCGGC
GCGCCGGTAA TGCTGTCGAT CCTCGGCGTC TATGCGGTAT TGGCAGCTGC GGTCTTCCGG
GTCGAACATC TCTGGCTGCC GATGGTCTCG CCTTTGAGCG CGGGAGCGCT TGCGTATATC
AGCGCCGGTG GTGTGCGCTA TGTCACGACG GGCCGCGAAC TCCGCGCCAC GCGCCACGCA
CTGGAGCGCC ACATGTCGCC GCAACTCGCG CAATACGCGC TGGAACACGG CGATAACCTC
GCCGGCGAGC GCCGCGAGCT CACCATCTTC TTCTCCGACA TTCGCAGCTT TACCACGCTC
ACCGAGAGCC TCCGCGACCA TCCCGACAAG TTGCTCGCGC TCCTCAATGA ATACCTCACG
GCGATGTGCG AGGTCATCTT CAAGTACGAG GGTGTAGTCG ACAAGTTCAT CGGCGACGGC
ATTCTCGCGC ACTGGGGAGC GTTCACGGAG GGCAAGAACC ACGCGCTGCT CGCGGCGCAA
GCCTCACTCG AGATGCTCGA CCGCCTCAAG CAGATGAACG CCGATTGGGC GGCGCAAGGC
CGCGACCAAC TGGCCATCGG CATTGGTCTC AACACCGGCG AAGTGACCTT CGGTAACGTG
GGCGCAGGCC AAAAGACTGA GTTCACCGTG ATCGGTGATC CGGTAAACTT GGCGTCGCGT
TTAGAAGGCC TCAATAAAGA ACACCATACT TCCATCATCA TCAGCGAATT CACTCTCGAA
CACTTGCGCG GTCTTGTGCA GACGCGCGAA CTCGGCGGCG TAAAAGTTAA GGGCAAGACG
ATCGAAACGC AGATTTATGA ATTGCAGGGT TTAGCAACAT CGCAAGAACC GGTCCCGGCG
CAAACCGTCG GGTCACGAGC TTAA
|
|---|
| Protein sequence | MAAAPRKQSR AQRLFQRGAA LAAVFTAVLL IGVENTKPMR WLETGTYDAR MTWSLDPSRA
DKSIVILDID NPSFEILKES FGRWPWTRMA WAGAIDYMAD GHPKVIAFDF KFGGSEDPKV
DQAFAESIRS GRNVLLGFSF DPAQIEDVSD VKNRKLALLA RESLSDSHIL GEHFPPADQS
LNVPLDILAK ASAGMGCLNA VYDDDGAVRR MPLGCNYGDL AFRTLDTRAV DYVRGHDASR
FIRDGRYGDS TGERIPVDAN GHLLVWFHGR PHGTYERVPF WKLVCSAAPD SCPNLKEPIP
PSYFKDKIVL VGASASGSFE LHSTPVGDAP GVFDRAAAID NLLHGEGILI APLWQHWILI
AIMALVGWMV LTRLGVSVVG APVMLSILGV YAVLAAAVFR VEHLWLPMVS PLSAGALAYI
SAGGVRYVTT GRELRATRHA LERHMSPQLA QYALEHGDNL AGERRELTIF FSDIRSFTTL
TESLRDHPDK LLALLNEYLT AMCEVIFKYE GVVDKFIGDG ILAHWGAFTE GKNHALLAAQ
ASLEMLDRLK QMNADWAAQG RDQLAIGIGL NTGEVTFGNV GAGQKTEFTV IGDPVNLASR
LEGLNKEHHT SIIISEFTLE HLRGLVQTRE LGGVKVKGKT IETQIYELQG LATSQEPVPA
QTVGSRA
|
|---|
| |