| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3882 |
|---|
| Symbol | |
|---|
| ID | 4072217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4590514 |
|---|
| End bp | 4591536 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637985906 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_592956 |
|---|
| Protein GI | 94970908 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAA CACTTATCGC AACTCTCGTG CTCGTCGCAT TCTCCAGCTG CGCCTTCGCC
CAGTTTGGCA GCGTGGTGAA TCGCGTCAAA AAAGCGAGCG ACGCCTTCAC CCCCTGGTCT
CCTGAACAGG AGAACGCAAT CGGCCAGGCA TCGGCCGCCA AGATGATCCA CGTCATGGGA
CTCATCGAGG ACCCGGCGCT GAACAAGTAC GTCCAGTACG TGGGCAGCAC CGTGGCGCGC
CAGGCCGGGC GCCCCGTGCC GTATCACTTC GCGATCCTCG AAGCGAAGAC TCCTGCCGGA
CGTTTCACCG TCAGTGCCTT CGCTTTGCCG GGTGGCTATG TGTTCGTCAC CAAGGGAGCG
CTCGATCACA TGACCGATGA GGCGCAACTC GCGGGCGTGC TCGCCCACGA AATTGCCCAC
GTCGATGGCC GCCACCTCGA AAAGGCGATC CAGAAGAAGA AGGCCAAGGG CATGGCGATC
GAAGAGGGCA CGTCGCACAT CCCCGGTCCT TCTGAGTTAA AGAACATCGC CAACAACGTC
ATTTCGGCTG CCTTGTTGGA GCAGGTCAAT CCGAAAGACG AAGACGAAGC GGACAAAAAG
GGAACGCAGT TCGCTGCCGG CGCCGGTTAC GACGCCACCG GACTGAAGCG TTTCCTCGAA
GTGCTGCAAG CGGAATCGCA AAGCGGCAAG GTGACCCCAC AGGACACGAA GTTGTGGGGC
GCTACCCATC CTCCGATCGG CGATCGCATC GCGCGCTTGA ACAGCCAGAC GGGCGCTGCT
CCGGGCGGCC AGACTCTACC GGACCGCTTC AAGACCGGCT ATGAAGGCAA GCCTGTGCTA
GCCGGCGCAA CCGTACCCGC TGCCACTCCG GCACAAGCCC CGGCGGCCAG CGCAAACGCG
TCCACGCCAG CGCAGACCAC CGCGCCGACG AACAACGCGA CGCAATCCAA CAACAGCACC
CAGCCCGCAC AGCAAGACGC CCAGAAAAAG AAGAAGAGCC TGGGCGGAAT GGTCCCTCAC
TAG
|
|---|
| Protein sequence | MRKTLIATLV LVAFSSCAFA QFGSVVNRVK KASDAFTPWS PEQENAIGQA SAAKMIHVMG
LIEDPALNKY VQYVGSTVAR QAGRPVPYHF AILEAKTPAG RFTVSAFALP GGYVFVTKGA
LDHMTDEAQL AGVLAHEIAH VDGRHLEKAI QKKKAKGMAI EEGTSHIPGP SELKNIANNV
ISAALLEQVN PKDEDEADKK GTQFAAGAGY DATGLKRFLE VLQAESQSGK VTPQDTKLWG
ATHPPIGDRI ARLNSQTGAA PGGQTLPDRF KTGYEGKPVL AGATVPAATP AQAPAASANA
STPAQTTAPT NNATQSNNST QPAQQDAQKK KKSLGGMVPH
|
|---|
| |