| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3863 |
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| Symbol | |
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| ID | 4071015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4573312 |
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| End bp | 4575354 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637985887 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_592937 |
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| Protein GI | 94970889 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.695211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAG AACGATTGCA GAAAATTATC GCCGCCGCAG GTATGGCGTC TCGCCGTAAA
GCCGAAGAAC TCGTCACCGC CGGGCGTGTC ACCGTGAACG GCGAAGTCAA GAATGAGCTC
GGCTCCAAGG CCGATCCCGA AACCGATGAC ATCCGCGTAG ACGGCAAGCC GCTCAAGGCC
GAGCAACTTG TGTACGTGCT GCTGCACAAG CCCAAGGGCT ACGTCACCAC CGTGAGCGAT
CCCGAAGGCC GCGAGACCGT GATGGACCTC GTCAAAGGCA TTCCCGCGCG GCTTTATCCC
GTCGGGCGCC TCGACTACCT CAGCGAAGGC CTGCTGCTGC TCACTAACGA CGGCGAAATG
GCCGCTAAGC TGACGCACGC TTCCACCCAC GTGCCGAAGA AGTATCTCGT GAAAGTCAGC
GGCGAACCCA CCGAAGAGCA GATCCAGGAA CTGCGCAATG GCGTGCAGCT TCCGCCGGAA
CAAGGGCACA TTCACGCCGA TCCGCGCGAA GGCGGACGTT TCGGTGGCGA GAAGCGTCGT
TCCACCGCGG TGAAGACCGC GCCGTGCAAG ATCGAACTCA CCCGCGAGGG CGACAACCCG
TGGTACGAAG TCACGCTCAA CGAGGGCCGC AACCGGCAAA TCCGCCGCAT GTTCGACTTC
ATCGGACACC ACGTGGAGAA GATCAAGCGC GTGGAGTACG GCCCGCTAAA ACTCGACGTG
GAGAACGGCG AGTTCCGCTT GCTGAATCCC GCGGAAGTAG CGCGGTTGAA GAAAGCGGCT
GAGGGCAAAC ACGAGGCCCC GCGTGCGCGC GACGAAAAAC CGCGCTTCGC TAAAGCGCGT
GGCGAACGCC CCGCGTTTGG CCGCGGGCGC AGCGATGACC GCGCCCCGTT CCAGAAAGGC
TCGTACAAAG ACCGTTCCGA GCTCGAGAGC GAGAAGGGTG AGCGCACGCG CACCGCACGC
TTCGACGCAG ATGGCAAGCG CATGGAAGAA GCACCGCGGG AACGTCGCGA GCGTCCGAAG
TTCGACCGCG GCGCGCGCCC GGCATTCCGT GGCAAGCGCG ACGATGCTCG TGGCGAACGC
CCAGCATTTC GCGGGAAACG CGATGATGCT CGTGGGGAAA GACCTGCGTT TCGCGGTAAG
CGCGATGACG CACGTAGCGA ACGTCCGGCA TTCCGTGCGC GTCGCGACGA CCAGGCTGGA
GATCGCCCAC GGTTTCCGCG GCGTGAGGAA GGCGAACGTC CAGCGTTCCG CGGTAAACGT
GACGATGCAC GTGGCGAACG TCCGGCATTC CGAGGCAAGC GCGACGATGC TCGTGGTGAG
CGTCCAGCAT TCCGAGGCAA GCGCGACGAT GCTCGTGGTG AGCGTCCAGC GTTCCGCGGT
AAACGGGATG ACGCGCGCGG CGAGCGTCCG GCATTCCGCG GGAAGCGCGA TGATGCACGT
GGTGAGCGGC CGGCATTCCG CGGTAAACGC GATGACGCAC GCGGCGAGCG CCCGAAATTC
GCGCGCAGCG GTGAACGCGG CGACCGTCCT TTCCGCGCAC GTCCGGCGGG CGATGGCGAA
TCGCGCGGCA AGAGCTTCGA TCGTCCGGCG CGTGCGGGTG CGCGACCGAA TTTCGGCGAT
CGTCCGAAAT TCGGTCCACG CAAAGAGGGC GGAGACCGTC CTTTCCGTGG CAAACCCGGC
GAAAAGAAGG AATTTCGCGG TAAGCGTGAG GGTGGTTCGG CCGCGCGCGG CGACCGTAAA
CCCGGCGGTT TTGGACGCGA TCGGCGTGAG GGCGGCGAAC GGCCGTTCCG CGGCGGAGAT
CGGCCGGCGC GTGGTGACCG TTTCGGCAAA AAGCCGGGCG GTCCGCGCAA GGACTTCCGT
CCGCGTCGCG ACGCAGGCGT CCCGGAACGG GAGGAACCGC GGTCACAGGA ATTCGTGGAT
AACGTCGCCA AGCGCTTCTC GGGAGGGCTA GAATCGGGAG TTCGCGGACG TGGGAAAGCT
CCGCGGCGTG GCCCGGGCGG CGCCCCCAAG AAGCCGTTCC GCAAGCCGAA GGATAGGCGA
TGA
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| Protein sequence | MSSERLQKII AAAGMASRRK AEELVTAGRV TVNGEVKNEL GSKADPETDD IRVDGKPLKA
EQLVYVLLHK PKGYVTTVSD PEGRETVMDL VKGIPARLYP VGRLDYLSEG LLLLTNDGEM
AAKLTHASTH VPKKYLVKVS GEPTEEQIQE LRNGVQLPPE QGHIHADPRE GGRFGGEKRR
STAVKTAPCK IELTREGDNP WYEVTLNEGR NRQIRRMFDF IGHHVEKIKR VEYGPLKLDV
ENGEFRLLNP AEVARLKKAA EGKHEAPRAR DEKPRFAKAR GERPAFGRGR SDDRAPFQKG
SYKDRSELES EKGERTRTAR FDADGKRMEE APRERRERPK FDRGARPAFR GKRDDARGER
PAFRGKRDDA RGERPAFRGK RDDARSERPA FRARRDDQAG DRPRFPRREE GERPAFRGKR
DDARGERPAF RGKRDDARGE RPAFRGKRDD ARGERPAFRG KRDDARGERP AFRGKRDDAR
GERPAFRGKR DDARGERPKF ARSGERGDRP FRARPAGDGE SRGKSFDRPA RAGARPNFGD
RPKFGPRKEG GDRPFRGKPG EKKEFRGKRE GGSAARGDRK PGGFGRDRRE GGERPFRGGD
RPARGDRFGK KPGGPRKDFR PRRDAGVPER EEPRSQEFVD NVAKRFSGGL ESGVRGRGKA
PRRGPGGAPK KPFRKPKDRR
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