| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3850 |
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| Symbol | |
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| ID | 4071002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4559734 |
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| End bp | 4560459 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637985874 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_592924 |
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| Protein GI | 94970876 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.843877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGTG CATCAGTGTC GGATCTCGCT AGCGCGATCG CAATTCGCAA CGAAGAAGGT
GCCATCGTTG CCGAGCTTAA GGCCGGCTCC GAGGACGCCT ACTCGTGGCT GATCGCGCAG
TACAACCAGC CGATCTACAG CCTCGTGTAC CGGATCCTCG ACGATCCTTC CGACGCTGCC
GATACTACGC AGGAAGTCTT CATCAAGGTC TTCCGCGGCA TCAAACGCTT CAACTCTGAG
TCGAGCCTGA AGACGTGGAT CTACCGCATC GCGCTCCATG AGGCTTCGAA CCGCCGACGT
TGGTTCTTCC GTCATAAGGC GAAGGAAGCC TCGATCGAAG CCGGCCCCGA GACCGAAGAA
CATAGCCACC CGATCGGACT CAAGGACACA TTGGTGGACG ACTCCGAGTC TCCGTTCGAC
ACCGTCTTCC ATACGGAAGT AAGTGCCAAG GTGGAAGAAG AGCTCAAGAA CTTGCAGGAG
CCTTATCGCA CCACCGTCAT CCTGCGCGAC ATTGAAGAGC TCTCGTACGA GCAGATTGCC
GAGATTACCG AAACTTCGCT CGGCACCGTG AAGTCAAGAT TGGTACGTGG GCGCGAAGCG
CTGAAAAAGC GGCTGACGCG CTATGTGAAA GAAATGGGCC CCGAACTCGG TTTGTGCGAT
CCGGCCGAAA AAAAGCGGCC GCCGTCATCC GCCACTGGAA GCAAGGGTAT TGAGGTTCAG
TTATGA
|
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| Protein sequence | MAGASVSDLA SAIAIRNEEG AIVAELKAGS EDAYSWLIAQ YNQPIYSLVY RILDDPSDAA
DTTQEVFIKV FRGIKRFNSE SSLKTWIYRI ALHEASNRRR WFFRHKAKEA SIEAGPETEE
HSHPIGLKDT LVDDSESPFD TVFHTEVSAK VEEELKNLQE PYRTTVILRD IEELSYEQIA
EITETSLGTV KSRLVRGREA LKKRLTRYVK EMGPELGLCD PAEKKRPPSS ATGSKGIEVQ
L
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