Gene Acid345_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3850 
Symbol 
ID4071002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4559734 
End bp4560459 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content57% 
IMG OID637985874 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_592924 
Protein GI94970876 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.843877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTG CATCAGTGTC GGATCTCGCT AGCGCGATCG CAATTCGCAA CGAAGAAGGT 
GCCATCGTTG CCGAGCTTAA GGCCGGCTCC GAGGACGCCT ACTCGTGGCT GATCGCGCAG
TACAACCAGC CGATCTACAG CCTCGTGTAC CGGATCCTCG ACGATCCTTC CGACGCTGCC
GATACTACGC AGGAAGTCTT CATCAAGGTC TTCCGCGGCA TCAAACGCTT CAACTCTGAG
TCGAGCCTGA AGACGTGGAT CTACCGCATC GCGCTCCATG AGGCTTCGAA CCGCCGACGT
TGGTTCTTCC GTCATAAGGC GAAGGAAGCC TCGATCGAAG CCGGCCCCGA GACCGAAGAA
CATAGCCACC CGATCGGACT CAAGGACACA TTGGTGGACG ACTCCGAGTC TCCGTTCGAC
ACCGTCTTCC ATACGGAAGT AAGTGCCAAG GTGGAAGAAG AGCTCAAGAA CTTGCAGGAG
CCTTATCGCA CCACCGTCAT CCTGCGCGAC ATTGAAGAGC TCTCGTACGA GCAGATTGCC
GAGATTACCG AAACTTCGCT CGGCACCGTG AAGTCAAGAT TGGTACGTGG GCGCGAAGCG
CTGAAAAAGC GGCTGACGCG CTATGTGAAA GAAATGGGCC CCGAACTCGG TTTGTGCGAT
CCGGCCGAAA AAAAGCGGCC GCCGTCATCC GCCACTGGAA GCAAGGGTAT TGAGGTTCAG
TTATGA
 
Protein sequence
MAGASVSDLA SAIAIRNEEG AIVAELKAGS EDAYSWLIAQ YNQPIYSLVY RILDDPSDAA 
DTTQEVFIKV FRGIKRFNSE SSLKTWIYRI ALHEASNRRR WFFRHKAKEA SIEAGPETEE
HSHPIGLKDT LVDDSESPFD TVFHTEVSAK VEEELKNLQE PYRTTVILRD IEELSYEQIA
EITETSLGTV KSRLVRGREA LKKRLTRYVK EMGPELGLCD PAEKKRPPSS ATGSKGIEVQ
L