Gene Acid345_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3826 
Symbol 
ID4071110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4522327 
End bp4523466 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content55% 
IMG OID637985849 
Productglycosyl transferase, group 1 
Protein accessionYP_592900 
Protein GI94970852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.107341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.560245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT TCAGAGTAGG TCTGAATCTC ATTTATCTGC AACCGGGCCG GCTTGGTGGG 
ACGGAAGTAT ATGCTCGCGA ATTGCTGCAA GAGATCGAGG AGCAGAACCA AGAATTTGAT
TTCGTTCTGT TTCTGAGTCC TGAATCGTAT GAGACCGTAA ATTATGTTTC TTCGCGATTT
CGCAAGGTAC GGGTGCCGAT TTCGTCACAA TCTCCGTCGA AGCGGCACTT GCTCGAGCAG
ACGATCCTGC CTCGGTTAAT TGCCCGAGAG GGAATCGACC TGCTGCACTC GATGGGGTAT
GTGTGTCCGC TGTTGGCTGA GTGCAAACAG GTTGTGACCG TGCACGACAT GCTGTATGAG
GTCCATCCAG AGTACTTGTC GAAACTGAAG TTGTTATTTT GGCGTTTTTT TGTTCCGCGA
TCGGTTCGCC GTTCGGTACG CACGATCGCG GTCTCGCAAA ATGCAAAAGA GGACATCGTC
AAGTACTGCG GAGTGGATTC TGCCAGGGTA GTCGCCATCC ATTCAGGAAT ACGGTTTCAA
CCGCCTGCGG ACGAGGCGCA AGTGACGGCA ACGTTGGACA AGTTTGGGAT TAAGCGGCCA
TTCGTGTTGG CTGTAGGCTG CGGCCGTCAC AAGAGGGTGG ATTTGATTGA GGAGGCTTGC
AGACAACTGG ACGTCCAGTT GGTAGTCACT GGCCTGCCTG AGAGCAGAGT AGTTCCACAT
AGGACGGAGC GAACGTTCTA CGCAGGATTC GTTTCGGCTG AGGATCTGCG CGCGCTTTAT
GCCGCAGCAG AGGTCTATGC AACCGCATCG AGCATGGAAG GGTTCGGCCT GACACTGCTG
GAGTCAATGA TGCAAAACAC TCCGGTGATC AGCTCTGCCG CGGGCTCGCT TCGAGAGGTT
GGAGGCGACG CTATTCTTGC TATTGAGACC CCGACTTCCG CTGCACTGGC GAAAGCGATT
TCCGAAGTTA TGTTGGATCG GCAACTGCGC GATCGACTCG TGAATGCGGG GAAGCAGCGA
CTGGGACAGT TCACTTGGAA AGAGTCGGCC CGTCGTCATC TCGATGTTTA TCGAGAGGTT
CTGTCGGGTA GCGCCGAACG CCCAATGGCG CCGCCCAGCA GGGTCGGAGT TGGAGGCTGA
 
Protein sequence
MATFRVGLNL IYLQPGRLGG TEVYARELLQ EIEEQNQEFD FVLFLSPESY ETVNYVSSRF 
RKVRVPISSQ SPSKRHLLEQ TILPRLIARE GIDLLHSMGY VCPLLAECKQ VVTVHDMLYE
VHPEYLSKLK LLFWRFFVPR SVRRSVRTIA VSQNAKEDIV KYCGVDSARV VAIHSGIRFQ
PPADEAQVTA TLDKFGIKRP FVLAVGCGRH KRVDLIEEAC RQLDVQLVVT GLPESRVVPH
RTERTFYAGF VSAEDLRALY AAAEVYATAS SMEGFGLTLL ESMMQNTPVI SSAAGSLREV
GGDAILAIET PTSAALAKAI SEVMLDRQLR DRLVNAGKQR LGQFTWKESA RRHLDVYREV
LSGSAERPMA PPSRVGVGG