| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3819 |
|---|
| Symbol | |
|---|
| ID | 4071103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4515558 |
|---|
| End bp | 4516313 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637985842 |
|---|
| Product | haloacid dehalogenase-like hydrolase |
|---|
| Protein accession | YP_592893 |
|---|
| Protein GI | 94970845 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.345861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGGCG ATGCAGTGAA CGTAGAGGTC TCGCCGCGCG CTTTGCGGCT GTTCGTTTTC
GACTTGGACG ATACTCTTTA CGCCGAAAGG GACTACGTTC GTAGTGGGTT TGCTCACATC
GCCAGAATTA CCGCCGATTC CGCAGGCATT CCTGCAGAGG ATATCGAAGT ATTTCTCTGG
GATGGTTTCA ACGAGAAGGT GCGCGGCAAC GCCTTCGATC TGCTCCTAAC TGCATTTCCG
GAGATCGCTG TCCACTGGAC GGTGGGCCGC CTTATCGAAG AATACCGTGG ACACAAGCCT
TCCATCGCTA CGGATCCCAC ACTTAAGAGC CTTCTTCGGA CGCTGCGGCA GAGCGGCTCA
AAAATTGGAG TGCTGACGGA CGGACCCGTT CAAAGTCAGC GGTCGAAATA CAATTCATTG
CAGCTTGCCG CGAATGTTGA TATAGCTATA TTTAACGACG AGTTCGGCGT GGAATACCGC
AAGCCTAACG AGCGCGGTTT CAGGGCGATT ATGTCGGCTT TTCATTTTCC ACCTGAAATG
TGCGTGTATG TAGGCGATAA TCCTGAAAAG GACTTCTATG CCCCCCGTCG CCTGGGTTGG
CATTCCGTTC GCTTACGACT TCCAAGTCAG TTGCGGCACG AACTCGAGCC TGCATCCGCT
GATTATTTTC CGGATCTTGA GTTCAATGCC CTGGCGGGAC TTGTGCAGTA CCTTGAGAAC
TGCTGTCATT GCTCGTGTAG CACAGAATCG AAGTGA
|
|---|
| Protein sequence | MGGDAVNVEV SPRALRLFVF DLDDTLYAER DYVRSGFAHI ARITADSAGI PAEDIEVFLW
DGFNEKVRGN AFDLLLTAFP EIAVHWTVGR LIEEYRGHKP SIATDPTLKS LLRTLRQSGS
KIGVLTDGPV QSQRSKYNSL QLAANVDIAI FNDEFGVEYR KPNERGFRAI MSAFHFPPEM
CVYVGDNPEK DFYAPRRLGW HSVRLRLPSQ LRHELEPASA DYFPDLEFNA LAGLVQYLEN
CCHCSCSTES K
|
|---|
| |