Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3803 |
Symbol | |
ID | 4071087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4494071 |
End bp | 4495105 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637985826 |
Product | polysaccharide export protein |
Protein accession | YP_592877 |
Protein GI | 94970829 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGGA AGATTTTTTT AGTCTCCCGC AATCTGCTTT TGATCGCCAG CAGCGTGCCT GCCACGATGT ATGGGCAAGC CTCGAATCAG CAGCAGCTCC AGCAACAGTT GTTACAACTT CAAATGCGCA GTGCTGGATC ACCGATGGGA TCTGCGCAAG GCGGACCGGG GAATACCATG CGCTCGGGTG CTGTGGTTGC GCCAGAGGAC GTTTCCAAAT TGAAGTTGGC GCCGGGCAGC ATGATCGAGG TCCACGTATT CGAGGAACCT GATCTTGATG GGACCTATCG GCTCGATACC ACGGGCCAGG TGAAACTTCC TCTCGCCGGC GACGTGCTCG TGAAGGAAAT GACGTTGCGT GAAGCGGAAG TCGCGATCCG GACCAGGCTA GTTTCCGAAG AAATTTTGAA GGACCCGCAT GTGGTTGTGA ACGTCGCGGA GTACAGCACG CAAAATATCG TCGTGCTCGG CGAGGTTGGT GCGCCCGGAC GGTACCCAGT GATCGGTTCC CGTACGCTGC TCGACGTTTT GGCGATGGCT GGTGGCCAAA CCGCAATGGC AGGTAACGAG ATTCTCGTCC ACCGGGACGG TACTCCCGCG GACAAAATTG AGAAGATCCA CTTTTCGCGA CGGAATGATG ATCCGACCGC GCTTGCATCT ACGATCAATC CAGGCGATAC GCTCGTTATT CGCAAGGCCG GAATCGTTTA TGTCCTGGGC TCGGTCAATC GTCCCGGCGG ATATGTGATG CAGGAAGCAG GCGACTTGAC CGTCAATCAA GCGATCGCGT TGGCATTAGG AACTGCACCG GGCGCCGACA CGGGAAAAGT TCGCGTGGTT CGTAAGAACG CTGATGGGAG CATGTCGGAG ATTCGGGCTC AGTATGACGA AGCCAACAAG GGCCAGGTAT TTCCATTCGA GTTGCAGCCA GAGGACGTTG TCTACGTTCC GGCAAACTGG CTGAAGACGA CGTTCTTGAA CACCCGGCAA TTCATGGGTC AAGTTGCCTC GGCAACGATC TACGCGGTGC AGTAG
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Protein sequence | MLRKIFLVSR NLLLIASSVP ATMYGQASNQ QQLQQQLLQL QMRSAGSPMG SAQGGPGNTM RSGAVVAPED VSKLKLAPGS MIEVHVFEEP DLDGTYRLDT TGQVKLPLAG DVLVKEMTLR EAEVAIRTRL VSEEILKDPH VVVNVAEYST QNIVVLGEVG APGRYPVIGS RTLLDVLAMA GGQTAMAGNE ILVHRDGTPA DKIEKIHFSR RNDDPTALAS TINPGDTLVI RKAGIVYVLG SVNRPGGYVM QEAGDLTVNQ AIALALGTAP GADTGKVRVV RKNADGSMSE IRAQYDEANK GQVFPFELQP EDVVYVPANW LKTTFLNTRQ FMGQVASATI YAVQ
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