Gene Acid345_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3798 
Symbol 
ID4071082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4488173 
End bp4489522 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content55% 
IMG OID637985821 
Producthypothetical protein 
Protein accessionYP_592872 
Protein GI94970824 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.878935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGAGT CATCCATCAT TCGACTAAAG TCGAGAGTTC TGCGTGGCCG CGGCGTCTAT 
TCGCTTGCCG ATCAGGTCTT AGTGAGCGGG TCGAACTTCG CGGCCAGTGT GGTTCTGGTG
CGCGGGCTAG GCTTGACTGA ATTCGGAAAG TTCAGTGTGG CGTTTGTCAT TCTTCTCTAC
GCCAATGCGC TGGAGATGAG TCTTATCAAT TCGCCGATGT TGACACTGGC TCCCGCGATG
GAAGAAGGCG AGAAGCGTCG TTTCGTGGAA GGGATGATGG CGCTCCAGGT TTCTACCAGC
GCGCTGTTGT TCGTAGTGTT CGGTCTCGGC GCCGGAATAA TCCACTTCTT GACCGGCTAC
CTCTCGGTTG CCAGCGCGGT TGCGCTGGCG GGAGCTGCGG GTACATTCCA ATTCCAGGAC
TGGGTGCGAC GCTACTACTT CTTGGCGAAT AAGAGCAAAC TCGCGATTGC CAGCGACTTC
ATTAGCTACT TCATCCAGTT CGTTATCTTC GTTCTGCTTT GGAAAACCGG TCGGCTCACG
CTGTTCTCCA CGTTTGTCAC AATGTTCGCG ACGTCCCTGG CTGGCGGCTT GATGGCGCCT
TTTACCGACG GCCTGAGACC GGCGTTTGAT CGATTGGGAG AGGTCTGGAA CCGATCGCGG
CATTTGGCGC GCGATCTGTT TGTTGCAAAC CAGATGCGGT GGGCAGGCCT GCAAGGCGTG
TTCCTGGTCG GGACCTACAT TGTCGGCGCA GCAGCGGCGG GAGGGCTCCG TGCGACGCAG
AACTTCGCAG GTCCAGTCAA CGTCGCTCTG AGTTCGCTGG AGAACTTCGT CCCGATCCGC
ATTACCGAGG AGCTTAAACA TCACGGAGTT CTACGCGCTC ACCGCTACAT GCGAATCGCG
ATCATCGGGG GAACACTGTT TTTTAGTGCA CTCTTTCTCC CGATTGTCGT CTTCGGACGA
CCGATCCTTC GGTTTACATA TGGTGCGGCT CTAGTCGAAT TTTACTGGCC TATGGTATTG
CAACTGGCTT GCCTTGTAAT TCAGATATCC GCAAATATGT GGTATCAGCT CTTCCGCGGA
ATGCAAGACT CCCGCGCGAT CCTGCGCGGA AATGCAGCTT TTGCATTGGT CAGCCTTCTG
ACCATTTACT CATTCGGAAA GCTCTGGGGC GTCACGGGAA TCGTACTGTC GTCTTTGGCG
GGCCAAAGTA GCATTGTCGT TTATTACGTA TTTCATTGGA CGCGTCATCG TCAGCAGATC
ATCGCTCGAT ATCCATCGCC CACCCCTACC GCGGAGGTGT TCGATGTACA AGGTAGCTTG
TCCGAGGTTG TCTCCGTGGA TGGGGCGTAG
 
Protein sequence
MKESSIIRLK SRVLRGRGVY SLADQVLVSG SNFAASVVLV RGLGLTEFGK FSVAFVILLY 
ANALEMSLIN SPMLTLAPAM EEGEKRRFVE GMMALQVSTS ALLFVVFGLG AGIIHFLTGY
LSVASAVALA GAAGTFQFQD WVRRYYFLAN KSKLAIASDF ISYFIQFVIF VLLWKTGRLT
LFSTFVTMFA TSLAGGLMAP FTDGLRPAFD RLGEVWNRSR HLARDLFVAN QMRWAGLQGV
FLVGTYIVGA AAAGGLRATQ NFAGPVNVAL SSLENFVPIR ITEELKHHGV LRAHRYMRIA
IIGGTLFFSA LFLPIVVFGR PILRFTYGAA LVEFYWPMVL QLACLVIQIS ANMWYQLFRG
MQDSRAILRG NAAFALVSLL TIYSFGKLWG VTGIVLSSLA GQSSIVVYYV FHWTRHRQQI
IARYPSPTPT AEVFDVQGSL SEVVSVDGA