Gene Acid345_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3776 
Symbol 
ID4071060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4464263 
End bp4465501 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content59% 
IMG OID637985799 
Productphosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase 
Protein accessionYP_592850 
Protein GI94970802 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGGCA AAAAGATGAA AATCGCATTG GGAGTGACCG GCGGAATTGC CGCTTACAAG 
GCGGCGGAAG TCCTGCGTCT TCTACAGGAT CGCGGCGTGA CGGTGCAGGT CATAATGACC
CGAGCCGCCC AGGAGTTCGT CCGCCCGTTG ACGTTTGCAG CACTCTCCGG CCAGAAGGTC
ATTACCGAGA TGTTCGGTGA AGGGAACGCG GAGCCGAATG TGGACTCCGC CGTCGAACAC
ATCAGCGTGG CGCAAGGAAT CGATGCTTTG CTGGTTGTTC CCGCGACTGC CGATAGTCTC
GCGAAGTTTG CCCAGGGCAT TGCCAACGAT TTCTTGTCCA CGCTCTACCT CGCCACCGCG
GCTCCCGTGA TCGTCGCGCC GGCGATGAAC GTGAACATGT GGGAGCACCC GGCGACCAAG
ATTAATCTTG AAACGCTACG AGCTCGCGGG GTCCACGTAA TCGAGCCCGG TGCTGGGTAC
TTGGCCTGCG GTATGGTCGG CGCCGGCAGG CTCGCCGAGC CCGAACACAT CGCCACCGAA
ACCATAGCGA TTTTAGGTAT TTCTCAGGAT ATGGTCGGCG AGACGGTGCT CGTTACGGCT
GGGCCCACCT ACGAGCCAAT CGATCCCGTA CGGTTCCTCG GCAACCGATC CAGCGGCAAG
ATGGGCTACG CGATTGCGGA AGCGGCGATT CGTCGTGGAG CGCGGGTTGT CCTCATTACC
GGCCCAACCG CACTGAAGCC TCCGTCTGCG GCCGAAGTTG TTCCGGTCGA AACTGCAGAG
CAGATGCGCA ACGCCGTCAT GGCGCACTTT CCCGACGCTG ACGTTGTCAT CAAAACTGCG
GCGGTCGCCG ACTACACTGC CAAGCACCGC TCTGACCAGA AGATCAAACG CAAGGGCGAG
ATGATGCTCG ATCTGGTTCC GACGACCGAC ATCCTCGCCG AATTGGGTCA GCGTCGCGTA
AAGCCGGCGC AAGTAATTAT AGGATTCGCA GCCGAAACCC AGGACGGCGT GTCCAACGCC
CGCGAAAAAT TACGCAAGAA GGGCGTTGAT GCCATCGTGA TGAACGATGT CTCGCGGGTG
GGATTAGGGT TTAGTTCCGA CCGCAATGCG GCGACCATCG TCACAGCGAG CGAAGAGATT
GAAATCCCCG AAATGACGAA GTTGGAGATG GCCCAGCGGG TTCTCGACCT CGCCGTGAAA
CTGCGCGCTT CAATCAGATC CGAGGTCACT TCCCGCTAA
 
Protein sequence
MLGKKMKIAL GVTGGIAAYK AAEVLRLLQD RGVTVQVIMT RAAQEFVRPL TFAALSGQKV 
ITEMFGEGNA EPNVDSAVEH ISVAQGIDAL LVVPATADSL AKFAQGIAND FLSTLYLATA
APVIVAPAMN VNMWEHPATK INLETLRARG VHVIEPGAGY LACGMVGAGR LAEPEHIATE
TIAILGISQD MVGETVLVTA GPTYEPIDPV RFLGNRSSGK MGYAIAEAAI RRGARVVLIT
GPTALKPPSA AEVVPVETAE QMRNAVMAHF PDADVVIKTA AVADYTAKHR SDQKIKRKGE
MMLDLVPTTD ILAELGQRRV KPAQVIIGFA AETQDGVSNA REKLRKKGVD AIVMNDVSRV
GLGFSSDRNA ATIVTASEEI EIPEMTKLEM AQRVLDLAVK LRASIRSEVT SR