Gene Acid345_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3769 
Symbol 
ID4071053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4453772 
End bp4454428 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID637985792 
Productphosphatase kdsC 
Protein accessionYP_592843 
Protein GI94970795 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG TACGAGCACG CAAGATCAAG CTGCTCCTTT TCGATGTCGA TGGCGTGATG 
ACTGACGGAA GTATCTGGCT GTTTCCTGCT CCTGCTGGAG CGCAGCACGG TACCAAGCAC
CTGCGCGAAG CGGTTGCGGA CCAGGGCGGC TACAGCGTGA GCGGTTCGAG CATGGTGGAA
GCCAAGGGCT TCAATGCGCA CGACGGCACG GCGTTTTCAC TGGCACGTCT TGGGGGATTG
AAGACCGGCA TTATCACCAA GCGCATCTCC GAGACGGTGG CGCTGCGCGC TCGCGACCTG
AAGATCGAAT ACGTGTACCA GGGTGCAGCC GATAAGCTGA CGGCCTTCGC GGAGATACTC
GACAAAGAGG GAATCCAGGC AGACGAGGCG TGTTTTGTTG GCGACGATGT GATTGATCTG
CCAGTGATGC GGGTGTGCGG ACTTGCGGTC GCGGTACGAA ATGCTCGCGA GAACGTGAAG
GATGAGGCCG ACTTCATTAC CGACCATCGC GGCGGCGACG GCGCCGTGCG AGATGTGGTT
GAGTATGTTT TAAAAGCGCA AGGAAAGCTC GATGACTGCG TTGACCAGTA CATCGCCTCC
CGTACTCCCG AGAGCGCTTT CGGTCATGCC GCGCGACGTC GAACAAAACG AGGGTGA
 
Protein sequence
MSKVRARKIK LLLFDVDGVM TDGSIWLFPA PAGAQHGTKH LREAVADQGG YSVSGSSMVE 
AKGFNAHDGT AFSLARLGGL KTGIITKRIS ETVALRARDL KIEYVYQGAA DKLTAFAEIL
DKEGIQADEA CFVGDDVIDL PVMRVCGLAV AVRNARENVK DEADFITDHR GGDGAVRDVV
EYVLKAQGKL DDCVDQYIAS RTPESAFGHA ARRRTKRG