| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3761 |
|---|
| Symbol | |
|---|
| ID | 4069336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 4444125 |
|---|
| End bp | 4445795 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637985783 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_592835 |
|---|
| Protein GI | 94970787 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1637] Predicted nuclease of the RecB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCCT TCTCCGAAGC CGAGCTGCGC GACTTTCTCG CTGACAACAT AACGAGGATT
GAGCCGGGAC TGACGCTTCT CGATAAAGAA AAGTACATCC CGAACGCAAT CGGCACCCGG
GGGTTCATAG ATTTGCTCGC TCAGGACGAA CGCGGCCATT TCGTACTCAT TGAGTTGAAG
CGCAGTGATG CTGCGTCTCG CGAAGCCATT CACGAAGTAC ACAAGTACGT TGAAGGTGTT
AAACGTCACT TGGGAGCGAG AGACGACGAG ATCCGTGTAA TTGTCGCCTC TACGGAATGG
CGCGAGCTAC TTCTTCCCTT TTCGCAATTT CTCGAATCAA CCCGAATCAC GGCGGAAGGC
ATTCGGTTGA TTGTAGGCGA GAGTGGTCTC CCTTCTCTCA CGGCTGAAAA GGTGGAGCCA
GTTCGCGTCA GTCGCGGTCG ATTCTTGGCT CCTTGGCACG AACTGAACCA CTACACATCT
GAGGACAGCC TCGCAAAGGG CATTCTCGAC TACGAGCATT CATGTCGCCT AAAGGGCGTT
GACGATTATG TTCTGGTCGT CTTTGAGGCA AGTCCCGACT GGTATCCGCT GGCTCAGGAA
GAGTTTCGGG CCTCCATGAT TCAAATGCAG GAGCAATTTG GAGTGCATGA CCCTGCCGAG
ATAGATGAGA TGGTGGCCAA ACTGCCGAAC TTTCGTTTCG CTTTGTACTT CGCATCCCAG
GTGCTCGGAC GAGAGTACTG CCTCGAAGTA CTGCGGCAGA ACTCCGAGGA CATGGAAGAG
CATGAAGAGA TCATCGATGG CATGGAAGAA GAAGAAGCGC TGCAATATCT GAACGACGCG
GTCCACAACT TGGCACCCAA AAAGCACAGA GACGGCTTTG AAATTGGCTA TCCCGGTAAG
TTTCAAACTC GATTCCGTGT TGGGAACCTC TGGATTCTGA AGCGGATTCA GCGTTACGGA
ATGTTTCAGA GGAACACATT GCTCTCCGAG GAAGAGATTC TGGAGGAGCT AGCCGGAAGT
GAAGGAGTTA CGGGGCAGCG CTTCAAGCGG CAAATTACGA TCAACAACAA GAGCCACATC
GCATCCGCTA AAGATGGTCT CCGAGAGTGC CTGGAACACA ACCCCGTTTG GCTTGCCCAC
ACCCTGAAAA TCATCGACGA AATTGAGAAG GATTATCCTG AGCTGGAGGC CAGCATCGAC
GTGTTCAACC CTTCGACTGG GTTGATGACG ATATATTTCG CAGCAACCCG GCCCGAGCCG
TTTGCATTCA TTCCACTTTT CACCATCGCA GTGCGGGACG GCGCGGCGAC CATCAGAGCT
TACCTTGGCT GTTTAGAAGG GGTCAGTTCA CCGATGAGCT TTCAATCGTT GATTGACAAA
TACTATGATG GCCAGATTGG AGTGTTGCTG CTGTCGGTAA CGTGGGGAGG CTATGAGCAG
AGGGACACAG ACATTCTCGA AGATTGCGGC CTCTTCTATC GTTCGTTCCG CGTAGATGAC
ATCGGATCGA CGAACGCCTT TAGCAGTTTG AGAGACGAAC GGTGGCGGCC GGTACCCCAG
TTTTTTCCAC CTGAGAAGTT CTCCGAACAC CTCGATCATC ATGGTGAATT TGTCATGGAA
CTTCTTCGCG AGATTGGTTC TCGTGACAAG GGCAGCTACT TCGAGAGCTA G
|
|---|
| Protein sequence | MPPFSEAELR DFLADNITRI EPGLTLLDKE KYIPNAIGTR GFIDLLAQDE RGHFVLIELK
RSDAASREAI HEVHKYVEGV KRHLGARDDE IRVIVASTEW RELLLPFSQF LESTRITAEG
IRLIVGESGL PSLTAEKVEP VRVSRGRFLA PWHELNHYTS EDSLAKGILD YEHSCRLKGV
DDYVLVVFEA SPDWYPLAQE EFRASMIQMQ EQFGVHDPAE IDEMVAKLPN FRFALYFASQ
VLGREYCLEV LRQNSEDMEE HEEIIDGMEE EEALQYLNDA VHNLAPKKHR DGFEIGYPGK
FQTRFRVGNL WILKRIQRYG MFQRNTLLSE EEILEELAGS EGVTGQRFKR QITINNKSHI
ASAKDGLREC LEHNPVWLAH TLKIIDEIEK DYPELEASID VFNPSTGLMT IYFAATRPEP
FAFIPLFTIA VRDGAATIRA YLGCLEGVSS PMSFQSLIDK YYDGQIGVLL LSVTWGGYEQ
RDTDILEDCG LFYRSFRVDD IGSTNAFSSL RDERWRPVPQ FFPPEKFSEH LDHHGEFVME
LLREIGSRDK GSYFES
|
|---|
| |