| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3727 |
|---|
| Symbol | |
|---|
| ID | 4069303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4404309 |
|---|
| End bp | 4405337 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637985750 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_592802 |
|---|
| Protein GI | 94970754 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCGG ACAACGAGGT TCGATCAAAT GGGCAGCGCC CGGTCGAACG CAGATTTGAA
CAAATCATAG GCAAAAGTCC CGCGTTGGAA TCAGCATTTG CGGACGTGGA ACAGGTAGCC
CCGACTGATT CCACTGTGCT GATCCTGGGG GAGACCGGGA CAGGTAAGGA GTTGATTGCT
CGAGCTATTC ACAATATCAG TCCTCGCTGC GGACGTCCGT TTGTAAAGCT GAATTGCGCT
GCTATTCCAT TCGACCTTTT AGAAAGTGAG CTTTTCGGCC ACGAAAAAGG TGCTTTCACC
GGAGCGATCG CGCAGAAGAT TGGACGTTTC GACATGGCAA ACACGGGGAC GCTCTTCTTG
GATGAAATAG GAGACATTCC CCTGGCGTTA CAGCCTAAGC TCCTGCGTGT GCTACAGGAG
CAGGAATTCG AGAGGCTAGG AAGTTGCCGT ACCCATCGCG TTGATGTGCG CTTAGTCGCT
GCCACTCATC GCAATTTGAT AGAAATGGTT AAACGGGCTG AATTCCGCAG TGATCTCTAT
TATCGTCTGA ATGTTTTTCC TGTCACTCTC CCAGCTCTCA GGGAACGCAA GGAGGACATC
CCCCTACTTG TCGCTCATTT TGTTAAGGTT TTTGGGCAAC GCATGGGCAA ACGAATCCTT
AATGTCCCGC AGAGCACGAT GGACGCTTTA ACGGAATATT CTTGGCCCGG CAACATTCGA
GAGCTACAAA ATCTGGTGGA ACGTGCCGTG ATTCGATCGA ACGACGGGTT GCTTCCGAAT
CCGCTACCTC AATCTGCGAA TTATCAACAC AACCAGTTCA CTCAGGGCGT GTTCGCTGAT
TCTCAGCGGG AAGTGATATT GAAAATGTTA GATACGTGCG GTTGGATTCT CGGGGGGTCC
CGTGGAGCAG CCAGTCGGTT GGGACTAAAA CGAACCACCC TAATCGCAAA AATGAAAAAG
CTCGGGATCT CAAGGCCCCT CTCCGAAAGC GATAGACCTC AACTGACTGA ACAGCAAGAG
AGCGATTAG
|
|---|
| Protein sequence | MESDNEVRSN GQRPVERRFE QIIGKSPALE SAFADVEQVA PTDSTVLILG ETGTGKELIA
RAIHNISPRC GRPFVKLNCA AIPFDLLESE LFGHEKGAFT GAIAQKIGRF DMANTGTLFL
DEIGDIPLAL QPKLLRVLQE QEFERLGSCR THRVDVRLVA ATHRNLIEMV KRAEFRSDLY
YRLNVFPVTL PALRERKEDI PLLVAHFVKV FGQRMGKRIL NVPQSTMDAL TEYSWPGNIR
ELQNLVERAV IRSNDGLLPN PLPQSANYQH NQFTQGVFAD SQREVILKML DTCGWILGGS
RGAASRLGLK RTTLIAKMKK LGISRPLSES DRPQLTEQQE SD
|
|---|
| |